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Deciphering Indigenous Bacterial Diversity of Co-Polluted Sites to Unravel Its Bioremediation Potential: A Metagenomic Approach.
- Source :
-
Journal of basic microbiology [J Basic Microbiol] 2024 Sep; Vol. 64 (9), pp. e2400303. Date of Electronic Publication: 2024 Jul 11. - Publication Year :
- 2024
-
Abstract
- Polluted drains across the globe are affected due to reckless disposal of untreated industrial effluents resulting in significant water pollution affecting microbial community structure/dynamics. To elucidate this, polluted samples were collected from Budha Nala (BN) drain, Tung Dhab (TD) drain, and wastewater treatment plant (WWTP) receiving an inflow of organic pollutants as well as heavy metals due to anthropogenic activities. The sample of unpolluted pristine soil (PS) was used as control, as there is no history of usage of organic chemicals at this site. The bacterial diversity of these samples was sequenced using the Illumina MiSeq platform by amplifying the V3/V4 region of 16S rRNA. The majority of operational taxonomic unit (OTUs) at polluted sites belonged to phyla Proteobacteria specifically Gammaproteobacteria class, followed by Actinobacteria, Bacteriodetes, Chloroflexi, Firmicutes, Planctomycetes, WS6, and TM7, whereas unpolluted site revealed the prevalence of Proteobacteria followed by Actinobacteria, Planctomycetes, Firmicutes, Acidobacteria, Chloroflexi, Bacteroidetes, Verrucomicrobia, and Nitrospirae. The data sets decode unclassified species of the phyla Proteobacteria, Bacteriodetes, Chloroflexi, Firmicutes, and WS6, along with some unclassified bacterial species. The study provided a comparative study of changed microbial community structure, their possible functions across diverse geographical locations, and identifying specific bacterial genera as pollution bio-indicators of aged polluted drains.<br /> (© 2024 Wiley‐VCH GmbH.)
- Subjects :
- Wastewater microbiology
Phylogeny
Biodiversity
Proteobacteria genetics
Proteobacteria classification
Proteobacteria metabolism
Proteobacteria isolation & purification
DNA, Bacterial genetics
Metals, Heavy metabolism
Metals, Heavy analysis
Microbiota
Biodegradation, Environmental
RNA, Ribosomal, 16S genetics
Bacteria genetics
Bacteria classification
Bacteria metabolism
Bacteria isolation & purification
Soil Microbiology
Metagenomics
Subjects
Details
- Language :
- English
- ISSN :
- 1521-4028
- Volume :
- 64
- Issue :
- 9
- Database :
- MEDLINE
- Journal :
- Journal of basic microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 38988320
- Full Text :
- https://doi.org/10.1002/jobm.202400303