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Decoupled degradation and translation enables noise modulation by poly(A) tails.

Authors :
Grandi C
Emmaneel M
Nelissen FHT
Roosenboom LWM
Petrova Y
Elzokla O
Hansen MMK
Source :
Cell systems [Cell Syst] 2024 Jun 19; Vol. 15 (6), pp. 526-543.e7.
Publication Year :
2024

Abstract

Poly(A) tails are crucial for mRNA translation and degradation, but the exact relationship between tail length and mRNA kinetics remains unclear. Here, we employ a small library of identical mRNAs that differ only in their poly(A)-tail length to examine their behavior in human embryonic kidney cells. We find that tail length strongly correlates with mRNA degradation rates but is decoupled from translation. Interestingly, an optimal tail length of ∼100 nt displays the highest translation rate, which is identical to the average endogenous tail length measured by nanopore sequencing. Furthermore, poly(A)-tail length variability-a feature of endogenous mRNAs-impacts translation efficiency but not mRNA degradation rates. Stochastic modeling combined with single-cell tracking reveals that poly(A) tails provide cells with an independent handle to tune gene expression fluctuations by decoupling mRNA degradation and translation. Together, this work contributes to the basic understanding of gene expression regulation and has potential applications in nucleic acid therapeutics.<br />Competing Interests: Declaration of interests The authors declare no competing interests.<br /> (Copyright © 2024 Elsevier Inc. All rights reserved.)

Details

Language :
English
ISSN :
2405-4720
Volume :
15
Issue :
6
Database :
MEDLINE
Journal :
Cell systems
Publication Type :
Academic Journal
Accession number :
38901403
Full Text :
https://doi.org/10.1016/j.cels.2024.05.004