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Network representation of multicellular activity in pancreatic islets: Technical considerations for functional connectivity analysis.
- Source :
-
PLoS computational biology [PLoS Comput Biol] 2024 May 13; Vol. 20 (5), pp. e1012130. Date of Electronic Publication: 2024 May 13 (Print Publication: 2024). - Publication Year :
- 2024
-
Abstract
- Within the islets of Langerhans, beta cells orchestrate synchronized insulin secretion, a pivotal aspect of metabolic homeostasis. Despite the inherent heterogeneity and multimodal activity of individual cells, intercellular coupling acts as a homogenizing force, enabling coordinated responses through the propagation of intercellular waves. Disruptions in this coordination are implicated in irregular insulin secretion, a hallmark of diabetes. Recently, innovative approaches, such as integrating multicellular calcium imaging with network analysis, have emerged for a quantitative assessment of the cellular activity in islets. However, different groups use distinct experimental preparations, microscopic techniques, apply different methods to process the measured signals and use various methods to derive functional connectivity patterns. This makes comparisons between findings and their integration into a bigger picture difficult and has led to disputes in functional connectivity interpretations. To address these issues, we present here a systematic analysis of how different approaches influence the network representation of islet activity. Our findings show that the choice of methods used to construct networks is not crucial, although care is needed when combining data from different islets. Conversely, the conclusions drawn from network analysis can be heavily affected by the pre-processing of the time series, the type of the oscillatory component in the signals, and by the experimental preparation. Our tutorial-like investigation aims to resolve interpretational issues, reconcile conflicting views, advance functional implications, and encourage researchers to adopt connectivity analysis. As we conclude, we outline challenges for future research, emphasizing the broader applicability of our conclusions to other tissues exhibiting complex multicellular dynamics.<br />Competing Interests: The authors have declared that no competing interests exist.<br /> (Copyright: © 2024 Šterk et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
- Subjects :
- Animals
Computational Biology methods
Mice
Insulin metabolism
Humans
Insulin-Secreting Cells physiology
Insulin-Secreting Cells metabolism
Insulin-Secreting Cells cytology
Insulin Secretion physiology
Models, Biological
Calcium metabolism
Calcium Signaling physiology
Islets of Langerhans physiology
Islets of Langerhans metabolism
Islets of Langerhans cytology
Subjects
Details
- Language :
- English
- ISSN :
- 1553-7358
- Volume :
- 20
- Issue :
- 5
- Database :
- MEDLINE
- Journal :
- PLoS computational biology
- Publication Type :
- Academic Journal
- Accession number :
- 38739680
- Full Text :
- https://doi.org/10.1371/journal.pcbi.1012130