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Arcicella gelida sp. nov. and Arcicella lustrica sp. nov., isolated from streams in China and re-examining the taxonomic status of all the genera within the families Spirosomataceae and Cytophagaceae .

Authors :
Lu H
Chen L
Huang L
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2024 Apr; Vol. 74 (4).
Publication Year :
2024

Abstract

Three Gram-stain-negative, aerobic, rod-shaped, non-motile strains (DC2W <superscript>T</superscript> , DC25W <superscript>T</superscript> , and LKC2W) were isolated from streams in China. Comparisons based on the 16S rRNA gene sequences showed that these three strains share 16S rRNA gene sequence similarity values over 97.0 % with the species of genus Arcicella . There was confusion due to the fact that all species of genera Flectobacillus , Aquirufa , and Sandaracinomonas show 16S rRNA gene sequence similarity of over 90.0 % to the above three strains, but the genus Flectobacillus belongs to the family Spirosomataceae and the genera Aquirufa and Sandaracinomonas belong to the family Cytophagaceae . Observing the phylogenetic trees, strains DC2W <superscript>T</superscript> , DC25W <superscript>T</superscript> , and LKC2W cluster closely with the species of genus Arcicella , but some species within the families Spirosomataceae and Cytophagaceae are not monophyletic. The phylogenomic tree also showed a confused phylogenetic relationships among these non-monophyletic species. Combining the phylogenetic relationships and average nucleotide identity values, the current taxonomic status of all the genera within the families Spirosomataceae and Cytophagaceae were re-examined. The genera ' Chryseosolibacter ', ' Dawidia ', and Chryseotalea should belong to the new family Chryseotaleaceae fam. nov., the genera Arcicella , Flectobacillus , Pseudarcicella , Aquirufa , and Sandaracinomonas should belong to the new family Flectobacillaceae fam. nov., the genera Fluviimonas , Taeseokella , Arcticibacterium , Emticicia , Jiulongibacter , Marinilongibacter , Lacihabitans , and Leadbetterella should belong to the new family Leadbetterellaceae fam. nov., the genus Litoribacter should be reassigned to the family Cyclobacteriaceae , and the genera Arundinibacter and Tellurirhabdus should be reassigned to the family Spirosomataceae . Strains DC2W <superscript>T</superscript> and DC25W <superscript>T</superscript> are reported to represent two novel species of the genus Arcicella , for which the names Arcicella gelida sp. nov. (type strain DC2W <superscript>T</superscript> =GDMCC 1.3209 <superscript>T</superscript> =KCTC 92559 <superscript>T</superscript> ) and Arcicella lustrica sp. nov. (type strain DC25W <superscript>T</superscript> =GDMCC 1.3210 <superscript>T</superscript> =KCTC 92557 <superscript>T</superscript> ) are proposed.

Details

Language :
English
ISSN :
1466-5034
Volume :
74
Issue :
4
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
38629951
Full Text :
https://doi.org/10.1099/ijsem.0.006345