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SLPA-Net: A Real-Time Recognition Network for Intelligent Stomata Localization and Phenotypic Analysis.

Authors :
Yang XH
Wang YT
Wu MH
Li F
Zhou CL
Yang LJ
Zheng C
Li Y
Li Z
Guo SY
Song CP
Source :
IEEE/ACM transactions on computational biology and bioinformatics [IEEE/ACM Trans Comput Biol Bioinform] 2024 May-Jun; Vol. 21 (3), pp. 372-382. Date of Electronic Publication: 2024 Jun 05.
Publication Year :
2024

Abstract

Plant stomatal phenotype traits play an important role in improving crop water use efficiency, stress resistance and yield. However, at present, the acquisition of phenotype traits mainly relies on manual measurement, which is time-consuming and laborious. In order to obtain high-throughput stomatal phenotype traits, we proposed a real-time recognition network SLPA-Net for stomata localization and phenotypic analysis. After locating and identifying stomatal density data, ellipse fitting is used to automatically obtain phenotype data such as apertures. Aiming at the problems of small stomata and high similarity to background, we introduced ECANet to improve the accuracy of stoma and aperture location. In order to effectively alleviate the unbalance problem in bounding box regression, we replaced the Loss function with a more effective Focal EIoU Loss. The experimental results show that SLPA-Net has excellent performance in the migration generalization and robustness of stomata and apertures detection and identification, as well as the correlation between stomata phenotype data obtained and artificial data.

Details

Language :
English
ISSN :
1557-9964
Volume :
21
Issue :
3
Database :
MEDLINE
Journal :
IEEE/ACM transactions on computational biology and bioinformatics
Publication Type :
Academic Journal
Accession number :
38335071
Full Text :
https://doi.org/10.1109/TCBB.2024.3364208