Back to Search Start Over

Integrative analysis identified two subtypes and a taurine-related signature to predict the prognosis and efficacy of immunotherapy in hepatocellular carcinoma.

Authors :
Lu Q
Lou Y
Zhang X
Yang H
Chen Y
Zhang H
Liang T
Bai X
Source :
Computational and structural biotechnology journal [Comput Struct Biotechnol J] 2023 Nov 10; Vol. 21, pp. 5561-5582. Date of Electronic Publication: 2023 Nov 10 (Print Publication: 2023).
Publication Year :
2023

Abstract

Hepatocellular carcinoma (HCC) is one of the most prevalent subtypes of primary liver cancer, with high mortality and poor prognosis. Immunotherapy has revolutionized treatment strategies for many cancers. However, only a subset of patients with HCC achieve satisfactory benefits from immunotherapy. Therefore, a reliable biomarker that could predict the prognosis and immunotherapy response in patients with HCC is urgently needed. Taurine plays an important role in many physiological processes. However, its participation in the occurrence and progression of liver cancer and regulation of the composition and function of various components of the immune microenvironment remains elusive. In this study, we identified and validated two heterogeneous subtypes of HCC with different taurine metabolic profiles, presenting distinct genomic features, clinicopathological characteristics, and immune landscapes, using multiple bulk transcriptome datasets. Subsequently, we constructed a risk model based on genes related to taurine metabolism to assess the prognosis, immune cell infiltration, immunotherapy response, and drug sensitivity of patients with HCC. The risk model was validated using several independent external cohorts and showed a robust predictive performance. In addition, we evaluated the expression patterns of taurine metabolism-related genes in the tumor microenvironment and the heterogeneity of taurine metabolism among cancer cells using a single-cell transcriptome. In conclusion, our study provides insights into the important role played by taurine metabolism in tumor progression and immune regulation. Furthermore, the risk model can serve as a biomarker to assess patient prognosis and immunotherapy response, potentially helping clinicians make more precise and personalized clinical decisions.<br />Competing Interests: The authors declare that they have no conflict of interest.<br /> (© 2023 The Authors.)

Details

Language :
English
ISSN :
2001-0370
Volume :
21
Database :
MEDLINE
Journal :
Computational and structural biotechnology journal
Publication Type :
Academic Journal
Accession number :
38034399
Full Text :
https://doi.org/10.1016/j.csbj.2023.11.014