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ChromaX: a fast and scalable breeding program simulator.
- Source :
-
Bioinformatics (Oxford, England) [Bioinformatics] 2023 Dec 01; Vol. 39 (12). - Publication Year :
- 2023
-
Abstract
- Summary: ChromaX is a Python library that enables the simulation of genetic recombination, genomic estimated breeding value calculations, and selection processes. By utilizing GPU processing, it can perform these simulations up to two orders of magnitude faster than existing tools with standard hardware. This offers breeders and scientists new opportunities to simulate genetic gain and optimize breeding schemes.<br />Availability and Implementation: The documentation is available at https://chromax.readthedocs.io. The code is available at https://github.com/kora-labs/chromax.<br /> (© The Author(s) 2023. Published by Oxford University Press.)
- Subjects :
- Genome
Gene Library
Computer Simulation
Software
Genomics
Subjects
Details
- Language :
- English
- ISSN :
- 1367-4811
- Volume :
- 39
- Issue :
- 12
- Database :
- MEDLINE
- Journal :
- Bioinformatics (Oxford, England)
- Publication Type :
- Academic Journal
- Accession number :
- 37991849
- Full Text :
- https://doi.org/10.1093/bioinformatics/btad691