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ELM-the Eukaryotic Linear Motif resource-2024 update.

Authors :
Kumar M
Michael S
Alvarado-Valverde J
Zeke A
Lazar T
Glavina J
Nagy-Kanta E
Donagh JM
Kalman ZE
Pascarelli S
Palopoli N
Dobson L
Suarez CF
Van Roey K
Krystkowiak I
Griffin JE
Nagpal A
Bhardwaj R
Diella F
Mészáros B
Dean K
Davey NE
Pancsa R
Chemes LB
Gibson TJ
Source :
Nucleic acids research [Nucleic Acids Res] 2024 Jan 05; Vol. 52 (D1), pp. D442-D455.
Publication Year :
2024

Abstract

Short Linear Motifs (SLiMs) are the smallest structural and functional components of modular eukaryotic proteins. They are also the most abundant, especially when considering post-translational modifications. As well as being found throughout the cell as part of regulatory processes, SLiMs are extensively mimicked by intracellular pathogens. At the heart of the Eukaryotic Linear Motif (ELM) Resource is a representative (not comprehensive) database. The ELM entries are created by a growing community of skilled annotators and provide an introduction to linear motif functionality for biomedical researchers. The 2024 ELM update includes 346 novel motif instances in areas ranging from innate immunity to both protein and RNA degradation systems. In total, 39 classes of newly annotated motifs have been added, and another 17 existing entries have been updated in the database. The 2024 ELM release now includes 356 motif classes incorporating 4283 individual motif instances manually curated from 4274 scientific publications and including >700 links to experimentally determined 3D structures. In a recent development, the InterPro protein module resource now also includes ELM data. ELM is available at: http://elm.eu.org.<br /> (© The Author(s) 2023. Published by Oxford University Press on behalf of Nucleic Acids Research.)

Details

Language :
English
ISSN :
1362-4962
Volume :
52
Issue :
D1
Database :
MEDLINE
Journal :
Nucleic acids research
Publication Type :
Academic Journal
Accession number :
37962385
Full Text :
https://doi.org/10.1093/nar/gkad1058