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Developmental landscape of computational techniques to explore the potential phytochemicals from Punica granatum peels for their antioxidant activity in Alzheimer's disease.

Authors :
Parveen S
Batool A
Shafiq N
Rashid M
Sultan A
Wondmie GF
Bin Jardan YA
Brogi S
Bourhia M
Source :
Frontiers in molecular biosciences [Front Mol Biosci] 2023 Oct 11; Vol. 10, pp. 1252178. Date of Electronic Publication: 2023 Oct 11 (Print Publication: 2023).
Publication Year :
2023

Abstract

Alzheimer's disease (AD) is more commonly found in women than in men as the risk increases with age. Phytochemicals are screened in silico from Punica granatum peels for their antioxidant activity to be utilized for Alzheimer's disease. Alzheimer's disease is inhibited by the hormone estrogen, which protects the brain from the bad effects of amyloid beta and acetylcholine (ACh), and is important for memory processing. For the purpose, a library of about 1,000 compounds from P. granatum were prepared and studied by applying integrated computational calculations like 3D-QSAR, molecular docking, MD simulation, ADMET, and density functional theory (DFT). The 3D-QSAR model screened the active compounds B25, B29, B35, B40, B45, B46, B48, B61, and B66 by the field points and activity atlas model from the prepared library. At the molecular level, docking was performed on active compounds for leading hit compounds such as B25 and B35 that displayed a high MolDock score, efficacy, and compatibility with drug delivery against the antioxidant activity. Optimization of the structure and chemical reactivity parameter of the hit compound was calculated by DFT. Moreover, ADMET prediction was evaluated to check the bioavailability and toxicity of the hit compound. Hesperidin (B25) is found to be a hit compound after the whole study and can be synthesized for potent drug discovery in the future.<br />Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.<br /> (Copyright © 2023 Parveen, Batool, Shafiq, Rashid, Sultan, Wondmie, Bin Jardan, Brogi and Bourhia.)

Details

Language :
English
ISSN :
2296-889X
Volume :
10
Database :
MEDLINE
Journal :
Frontiers in molecular biosciences
Publication Type :
Academic Journal
Accession number :
37886033
Full Text :
https://doi.org/10.3389/fmolb.2023.1252178