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Oncogenic context shapes the fitness landscape of tumor suppression.

Authors :
Blair LM
Juan JM
Sebastian L
Tran VB
Nie W
Wall GD
Gerceker M
Lai IK
Apilado EA
Grenot G
Amar D
Foggetti G
Do Carmo M
Ugur Z
Deng D
Chenchik A
Paz Zafra M
Dow LE
Politi K
MacQuitty JJ
Petrov DA
Winslow MM
Rosen MJ
Winters IP
Source :
Nature communications [Nat Commun] 2023 Oct 12; Vol. 14 (1), pp. 6422. Date of Electronic Publication: 2023 Oct 12.
Publication Year :
2023

Abstract

Tumors acquire alterations in oncogenes and tumor suppressor genes in an adaptive walk through the fitness landscape of tumorigenesis. However, the interactions between oncogenes and tumor suppressor genes that shape this landscape remain poorly resolved and cannot be revealed by human cancer genomics alone. Here, we use a multiplexed, autochthonous mouse platform to model and quantify the initiation and growth of more than one hundred genotypes of lung tumors across four oncogenic contexts: KRAS G12D, KRAS G12C, BRAF V600E, and EGFR L858R. We show that the fitness landscape is rugged-the effect of tumor suppressor inactivation often switches between beneficial and deleterious depending on the oncogenic context-and shows no evidence of diminishing-returns epistasis within variants of the same oncogene. These findings argue against a simple linear signaling relationship amongst these three oncogenes and imply a critical role for off-axis signaling in determining the fitness effects of inactivating tumor suppressors.<br /> (© 2023. Springer Nature Limited.)

Details

Language :
English
ISSN :
2041-1723
Volume :
14
Issue :
1
Database :
MEDLINE
Journal :
Nature communications
Publication Type :
Academic Journal
Accession number :
37828026
Full Text :
https://doi.org/10.1038/s41467-023-42156-y