Back to Search Start Over

Dermatobacter hominis gen. nov., sp. nov., a new member of the family Iamiaceae, revealed the potential utilisation of skin-derived metabolites.

Authors :
Jo H
Baek C
Heo YM
Kim HB
Lee H
Kang S
Mun S
Oh Y
Ko D
Han K
Riesco R
Trujillo ME
Lee DG
Source :
Antonie van Leeuwenhoek [Antonie Van Leeuwenhoek] 2023 Nov; Vol. 116 (11), pp. 1139-1150. Date of Electronic Publication: 2023 Sep 02.
Publication Year :
2023

Abstract

A non-motile, novel actinobacterial strain, Kera-3 <superscript>T</superscript> , which is a gram-positive, aerobic, rod-shaped bacterium, was isolated from human keratinocytes on 1/10 diluted R2A agar. Whole-cell hydrolysis of amino acids revealed the presence of meso-DAP, alanine, and glutamic acid. The predominant menaquinone was MK-9 (H8), whereas the primary fatty acids were C <subscript>16:0</subscript> and C <subscript>18:1</subscript> ω9c. The major phospholipids included diphosphatidylglycerol and aminophospholipids, along with an unidentified phosphoglycolipid and an aminophosphoglycolipid. The G+C content of the genomic DNA was 73.2%, based on the complete genome sequence. Phylogenetic analyses of the 16S rRNA gene sequence and phylogenomic analysis of 91 core genes showed that strain Kera-3 <superscript>T</superscript> formed a new lineage in the family Iamiaceae, with the closest neighbour Rhabdothermincola sediminis SYSU G02662 <superscript>T</superscript> having 91.19% 16S rRNA gene sequence identity. A comparative genomic study of the predicted general metabolism and carbohydrate-active enzymes supported the phylogenetic and phylogenomic data. Based on the analysis of physiological, biochemical, and genomic characteristics, strain Kera-3 <superscript>T</superscript> can be distinguished from known genera in the family Iamiaceae and represents a novel genus and species. Therefore, the name Dermatobacter hominis gen. nov., sp. nov. was proposed, with the type strain Kera-3 <superscript>T</superscript> (= KACC 22415 <superscript>T</superscript>  = LMG 32493 <superscript>T</superscript> ).<br /> (© 2023. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)

Details

Language :
English
ISSN :
1572-9699
Volume :
116
Issue :
11
Database :
MEDLINE
Journal :
Antonie van Leeuwenhoek
Publication Type :
Academic Journal
Accession number :
37658955
Full Text :
https://doi.org/10.1007/s10482-023-01873-6