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Dermatobacter hominis gen. nov., sp. nov., a new member of the family Iamiaceae, revealed the potential utilisation of skin-derived metabolites.
- Source :
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Antonie van Leeuwenhoek [Antonie Van Leeuwenhoek] 2023 Nov; Vol. 116 (11), pp. 1139-1150. Date of Electronic Publication: 2023 Sep 02. - Publication Year :
- 2023
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Abstract
- A non-motile, novel actinobacterial strain, Kera-3 <superscript>T</superscript> , which is a gram-positive, aerobic, rod-shaped bacterium, was isolated from human keratinocytes on 1/10 diluted R2A agar. Whole-cell hydrolysis of amino acids revealed the presence of meso-DAP, alanine, and glutamic acid. The predominant menaquinone was MK-9 (H8), whereas the primary fatty acids were C <subscript>16:0</subscript> and C <subscript>18:1</subscript> ω9c. The major phospholipids included diphosphatidylglycerol and aminophospholipids, along with an unidentified phosphoglycolipid and an aminophosphoglycolipid. The G+C content of the genomic DNA was 73.2%, based on the complete genome sequence. Phylogenetic analyses of the 16S rRNA gene sequence and phylogenomic analysis of 91 core genes showed that strain Kera-3 <superscript>T</superscript> formed a new lineage in the family Iamiaceae, with the closest neighbour Rhabdothermincola sediminis SYSU G02662 <superscript>T</superscript> having 91.19% 16S rRNA gene sequence identity. A comparative genomic study of the predicted general metabolism and carbohydrate-active enzymes supported the phylogenetic and phylogenomic data. Based on the analysis of physiological, biochemical, and genomic characteristics, strain Kera-3 <superscript>T</superscript> can be distinguished from known genera in the family Iamiaceae and represents a novel genus and species. Therefore, the name Dermatobacter hominis gen. nov., sp. nov. was proposed, with the type strain Kera-3 <superscript>T</superscript> (= KACC 22415 <superscript>T</superscript> = LMG 32493 <superscript>T</superscript> ).<br /> (© 2023. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)
Details
- Language :
- English
- ISSN :
- 1572-9699
- Volume :
- 116
- Issue :
- 11
- Database :
- MEDLINE
- Journal :
- Antonie van Leeuwenhoek
- Publication Type :
- Academic Journal
- Accession number :
- 37658955
- Full Text :
- https://doi.org/10.1007/s10482-023-01873-6