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Reference genome for the American rubyspot damselfly, Hetaerina americana.

Authors :
Grether GF
Beninde J
Beraut E
Chumchim N
Escalona M
MacDonald ZG
Miller C
Sahasrabudhe R
Shedlock AM
Toffelmier E
Shaffer HB
Source :
The Journal of heredity [J Hered] 2023 Jun 22; Vol. 114 (4), pp. 385-394.
Publication Year :
2023

Abstract

Damselflies and dragonflies (Order: Odonata) play important roles in both aquatic and terrestrial food webs and can serve as sentinels of ecosystem health and predictors of population trends in other taxa. The habitat requirements and limited dispersal of lotic damselflies make them especially sensitive to habitat loss and fragmentation. As such, landscape genomic studies of these taxa can help focus conservation efforts on watersheds with high levels of genetic diversity, local adaptation, and even cryptic endemism. Here, as part of the California Conservation Genomics Project (CCGP), we report the first reference genome for the American rubyspot damselfly, Hetaerina americana, a species associated with springs, streams and rivers throughout California. Following the CCGP assembly pipeline, we produced two de novo genome assemblies. The primary assembly includes 1,630,044,487 base pairs, with a contig N50 of 5.4 Mb, a scaffold N50 of 86.2 Mb, and a BUSCO completeness score of 97.6%. This is the seventh Odonata genome to be made publicly available and the first for the subfamily Hetaerininae. This reference genome fills an important phylogenetic gap in our understanding of Odonata genome evolution, and provides a genomic resource for a host of interesting ecological, evolutionary, and conservation questions for which the rubyspot damselfly genus Hetaerina is an important model system.<br /> (© The American Genetic Association. 2023.)

Details

Language :
English
ISSN :
1465-7333
Volume :
114
Issue :
4
Database :
MEDLINE
Journal :
The Journal of heredity
Publication Type :
Academic Journal
Accession number :
37195415
Full Text :
https://doi.org/10.1093/jhered/esad031