Back to Search Start Over

Systems Biology: Identifiability Analysis and Parameter Identification via Systems-Biology-Informed Neural Networks.

Authors :
Daneker M
Zhang Z
Karniadakis GE
Lu L
Source :
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2023; Vol. 2634, pp. 87-105.
Publication Year :
2023

Abstract

The dynamics of systems biological processes are usually modeled by a system of ordinary differential equations (ODEs) with many unknown parameters that need to be inferred from noisy and sparse measurements. Here, we introduce systems-biology-informed neural networks for parameter estimation by incorporating the system of ODEs into the neural networks. To complete the workflow of system identification, we also describe structural and practical identifiability analysis to analyze the identifiability of parameters. We use the ultradian endocrine model for glucose-insulin interaction as the example to demonstrate all these methods and their implementation.<br /> (© 2023. Springer Science+Business Media, LLC, part of Springer Nature.)

Details

Language :
English
ISSN :
1940-6029
Volume :
2634
Database :
MEDLINE
Journal :
Methods in molecular biology (Clifton, N.J.)
Publication Type :
Academic Journal
Accession number :
37074575
Full Text :
https://doi.org/10.1007/978-1-0716-3008-2_4