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Systems Biology: Identifiability Analysis and Parameter Identification via Systems-Biology-Informed Neural Networks.
- Source :
-
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2023; Vol. 2634, pp. 87-105. - Publication Year :
- 2023
-
Abstract
- The dynamics of systems biological processes are usually modeled by a system of ordinary differential equations (ODEs) with many unknown parameters that need to be inferred from noisy and sparse measurements. Here, we introduce systems-biology-informed neural networks for parameter estimation by incorporating the system of ODEs into the neural networks. To complete the workflow of system identification, we also describe structural and practical identifiability analysis to analyze the identifiability of parameters. We use the ultradian endocrine model for glucose-insulin interaction as the example to demonstrate all these methods and their implementation.<br /> (© 2023. Springer Science+Business Media, LLC, part of Springer Nature.)
- Subjects :
- Neural Networks, Computer
Models, Biological
Systems Biology methods
Subjects
Details
- Language :
- English
- ISSN :
- 1940-6029
- Volume :
- 2634
- Database :
- MEDLINE
- Journal :
- Methods in molecular biology (Clifton, N.J.)
- Publication Type :
- Academic Journal
- Accession number :
- 37074575
- Full Text :
- https://doi.org/10.1007/978-1-0716-3008-2_4