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Disclosing quantitative RT-PCR raw data during manuscript submission: a call for action.

Authors :
Untergasser A
Hellemans J
Pfaffl MW
Ruijter JM
van den Hoff MJB
Dragomir MP
Adamoski D
Dias SMG
Reis RM
Ferracin M
Dias-Neto E
Marsh I
Kubista M
Fabbri M
Goel A
SlabĂ˝ O
Knutsen E
Chen B
Negrini M
Mimori K
Pichler M
Papatriantafyllou M
Anfossi S
Schmittgen TD
Huggett J
Bustin S
Vandesompele J
Calin GA
Source :
Molecular oncology [Mol Oncol] 2023 May; Vol. 17 (5), pp. 713-717. Date of Electronic Publication: 2023 Mar 27.
Publication Year :
2023

Abstract

Accuracy and transparency of scientific data are becoming more and more relevant with the increasing concern regarding the evaluation of data reproducibility in many research areas. This concern is also true for quantifying coding and noncoding RNAs, with the remarkable increase in publications reporting RNA profiling and sequencing studies. To address the problem, we propose the following recommendations: (a) accurate documentation of experimental procedures in Materials and methods (and not only in the supplementary information, as many journals have a strict mandate for making Materials and methods as visible as possible in the main text); (b) submission of RT-qPCR raw data for all experiments reported; and (c) adoption of a unified, simple format for submitted RT-qPCR raw data. The Real-time PCR Data Essential Spreadsheet Format (RDES) was created for this purpose.<br /> (© 2023 The Authors. Molecular Oncology published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies.)

Details

Language :
English
ISSN :
1878-0261
Volume :
17
Issue :
5
Database :
MEDLINE
Journal :
Molecular oncology
Publication Type :
Academic Journal
Accession number :
36916500
Full Text :
https://doi.org/10.1002/1878-0261.13418