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Structural and biochemical insight into a modular β-1,4-galactan synthase in plants.

Authors :
Prabhakar PK
Pereira JH
Taujale R
Shao W
Bharadwaj VS
Chapla D
Yang JY
Bomble YJ
Moremen KW
Kannan N
Hammel M
Adams PD
Scheller HV
Urbanowicz BR
Source :
Nature plants [Nat Plants] 2023 Mar; Vol. 9 (3), pp. 486-500. Date of Electronic Publication: 2023 Feb 27.
Publication Year :
2023

Abstract

Rhamnogalacturonan I (RGI) is a structurally complex pectic polysaccharide with a backbone of alternating rhamnose and galacturonic acid residues substituted with arabinan and galactan side chains. Galactan synthase 1 (GalS1) transfers galactose and arabinose to either extend or cap the β-1,4-galactan side chains of RGI, respectively. Here we report the structure of GalS1 from Populus trichocarpa, showing a modular protein consisting of an N-terminal domain that represents the founding member of a new family of carbohydrate-binding module, CBM95, and a C-terminal glycosyltransferase family 92 (GT92) catalytic domain that adopts a GT-A fold. GalS1 exists as a dimer in vitro, with stem domains interacting across the chains in a 'handshake' orientation that is essential for maintaining stability and activity. In addition to understanding the enzymatic mechanism of GalS1, we gained insight into the donor and acceptor substrate binding sites using deep evolutionary analysis, molecular simulations and biochemical studies. Combining all the results, a mechanism for GalS1 catalysis and a new model for pectic galactan side-chain addition are proposed.<br /> (© 2023. The Author(s), under exclusive licence to Springer Nature Limited.)

Details

Language :
English
ISSN :
2055-0278
Volume :
9
Issue :
3
Database :
MEDLINE
Journal :
Nature plants
Publication Type :
Academic Journal
Accession number :
36849618
Full Text :
https://doi.org/10.1038/s41477-023-01358-4