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Ultra-fast semi-empirical quantum chemistry for high-throughput computational campaigns with Sparrow.

Authors :
Bosia F
Zheng P
Vaucher A
Weymuth T
Dral PO
Reiher M
Source :
The Journal of chemical physics [J Chem Phys] 2023 Feb 07; Vol. 158 (5), pp. 054118.
Publication Year :
2023

Abstract

Semi-empirical quantum chemical approaches are known to compromise accuracy for the feasibility of calculations on huge molecules. However, the need for ultrafast calculations in interactive quantum mechanical studies, high-throughput virtual screening, and data-driven machine learning has shifted the emphasis toward calculation runtimes recently. This comes with new constraints for the software implementation as many fast calculations would suffer from a large overhead of the manual setup and other procedures that are comparatively fast when studying a single molecular structure, but which become prohibitively slow for high-throughput demands. In this work, we discuss the effect of various well-established semi-empirical approximations on calculation speed and relate this to data transfer rates from the raw-data source computer to the results of the visualization front end. For the former, we consider desktop computers, local high performance computing, and remote cloud services in order to elucidate the effect on interactive calculations, for web and cloud interfaces in local applications, and in world-wide interactive virtual sessions. The models discussed in this work have been implemented into our open-source software SCINE Sparrow.

Details

Language :
English
ISSN :
1089-7690
Volume :
158
Issue :
5
Database :
MEDLINE
Journal :
The Journal of chemical physics
Publication Type :
Academic Journal
Accession number :
36754821
Full Text :
https://doi.org/10.1063/5.0136404