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DRAGON-Data: a platform and protocol for integrating genomic and phenotypic data across large psychiatric cohorts.
- Source :
-
BJPsych open [BJPsych Open] 2023 Feb 08; Vol. 9 (2), pp. e32. Date of Electronic Publication: 2023 Feb 08. - Publication Year :
- 2023
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Abstract
- Background: Current psychiatric diagnoses, although heritable, have not been clearly mapped onto distinct underlying pathogenic processes. The same symptoms often occur in multiple disorders, and a substantial proportion of both genetic and environmental risk factors are shared across disorders. However, the relationship between shared symptoms and shared genetic liability is still poorly understood.<br />Aims: Well-characterised, cross-disorder samples are needed to investigate this matter, but few currently exist. Our aim is to develop procedures to purposely curate and aggregate genotypic and phenotypic data in psychiatric research.<br />Method: As part of the Cardiff MRC Mental Health Data Pathfinder initiative, we have curated and harmonised phenotypic and genetic information from 15 studies to create a new data repository, DRAGON-Data. To date, DRAGON-Data includes over 45 000 individuals: adults and children with neurodevelopmental or psychiatric diagnoses, affected probands within collected families and individuals who carry a known neurodevelopmental risk copy number variant.<br />Results: We have processed the available phenotype information to derive core variables that can be reliably analysed across groups. In addition, all data-sets with genotype information have undergone rigorous quality control, imputation, copy number variant calling and polygenic score generation.<br />Conclusions: DRAGON-Data combines genetic and non-genetic information, and is available as a resource for research across traditional psychiatric diagnostic categories. Algorithms and pipelines used for data harmonisation are currently publicly available for the scientific community, and an appropriate data-sharing protocol will be developed as part of ongoing projects (DATAMIND) in partnership with Health Data Research UK.
Details
- Language :
- English
- ISSN :
- 2056-4724
- Volume :
- 9
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- BJPsych open
- Publication Type :
- Academic Journal
- Accession number :
- 36752340
- Full Text :
- https://doi.org/10.1192/bjo.2022.636