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Crystal Structure Analysis of Sarcoplasmic-Calcium-Binding Protein: An Allergen in Scylla paramamosain .

Authors :
Chen Y
Jin T
Li M
Yun X
Huan F
Liu Q
Hu M
Wei X
Zheng P
Liu G
Source :
Journal of agricultural and food chemistry [J Agric Food Chem] 2023 Jan 18; Vol. 71 (2), pp. 1214-1223. Date of Electronic Publication: 2023 Jan 05.
Publication Year :
2023

Abstract

The structure of allergenic proteins provides important information about the binding of allergens to antibodies. In this study, the crystal structure of Scy p 4 with a resolution of 1.60 Å was obtained by X-ray diffraction. Epitope mapping of Scy p 4 revealed that linear epitopes are located on the surface of Scy p 4. Also, conformational epitopes are mostly located in the structural conservative region. Further structural comparison, surface electrostatic potential, and hydrogen bond force analysis showed that mutation of Asp <subscript>70</subscript> and Asp <subscript>18/20/70</subscript> would lead to calcium-binding capacity being lost and destruction of allergenicity. Furthermore, a comparative analysis of structure showed that sarcoplasmic-calcium-binding protein (SCP) had high sequence, secondary, and spatial structural identity in crustaceans, which may be an important factor leading to cross-reactivity among crustaceans. The structure of Scy p 4 provides a template for epitope evaluation and localization of SCPs, which will help to reveal cross-reactivity among species.

Details

Language :
English
ISSN :
1520-5118
Volume :
71
Issue :
2
Database :
MEDLINE
Journal :
Journal of agricultural and food chemistry
Publication Type :
Academic Journal
Accession number :
36602420
Full Text :
https://doi.org/10.1021/acs.jafc.2c07267