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igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV).

Authors :
Robinson JT
Thorvaldsdottir H
Turner D
Mesirov JP
Source :
Bioinformatics (Oxford, England) [Bioinformatics] 2023 Jan 01; Vol. 39 (1).
Publication Year :
2023

Abstract

Summary: igv.js is an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV). It can be easily dropped into any web page with a single line of code and has no external dependencies. The viewer runs completely in the web browser, with no backend server and no data pre-processing required.<br />Availability and Implementation: The igv.js JavaScript component can be installed from NPM at https://www.npmjs.com/package/igv. The source code is available at https://github.com/igvteam/igv.js under the MIT open-source license. IGV-Web, the end-user application built around igv.js, is available at https://igv.org/app. The source code is available at https://github.com/igvteam/igv-webapp under the MIT open-source license.<br />Supplementary Information: Supplementary information is available at Bioinformatics online.<br /> (© The Author(s) 2022. Published by Oxford University Press.)

Subjects

Subjects :
Web Browser
Genomics
Software

Details

Language :
English
ISSN :
1367-4811
Volume :
39
Issue :
1
Database :
MEDLINE
Journal :
Bioinformatics (Oxford, England)
Publication Type :
Academic Journal
Accession number :
36562559
Full Text :
https://doi.org/10.1093/bioinformatics/btac830