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Identification of Potential microRNA Panels for Male Non-Small Cell Lung Cancer Identification Using Microarray Datasets and Bioinformatics Methods.

Authors :
HaranguČ™ A
Lajos R
Budisan L
Zanoaga O
Ciocan C
Bica C
Pirlog R
Simon I
Simon M
Braicu C
Berindan-Neagoe I
Source :
Journal of personalized medicine [J Pers Med] 2022 Dec 13; Vol. 12 (12). Date of Electronic Publication: 2022 Dec 13.
Publication Year :
2022

Abstract

Background: Non-small cell lung cancer (NSCLC) is still one of the types of cancer with the highest death rates. MicroRNAs (miRNAs) play essential roles in NSCLC development. This study evaluates miRNA expression patterns and specific mechanisms in male patients with NSCLC. Methods: We report an integrated microarray analysis of miRNAs for eight matched samples of males with NSCLC compared to the study of public datasets of males with NSCLC from TCGA, followed by qRT-PCR validation. Results: For the TCGA dataset, we identified 385 overexpressed and 75 underexpressed miRNAs. Our cohort identified 54 overexpressed and 77 underexpressed miRNAs, considering a fold-change (FC) of ±1.5 and p < 0.05 as the cutoff value. The common miRNA signature consisted of eight overexpressed and nine underexpressed miRNAs. Validation was performed using qRT-PCR on the tissue samples for miR-183-3p and miR-34c-5p and on plasma samples for miR-34c-5p. We also created mRNA-miRNA regulatory networks to identify critical molecules, revealing NSCLC signaling pathways related to underexpressed and overexpressed transcripts. The genes targeted by these transcripts were correlated with overall survival. Conclusions: miRNAs and some of their target genes could play essential roles in investigating the mechanisms involved in NSCLC evolution and provide opportunities to identify potential therapeutic targets.

Details

Language :
English
ISSN :
2075-4426
Volume :
12
Issue :
12
Database :
MEDLINE
Journal :
Journal of personalized medicine
Publication Type :
Academic Journal
Accession number :
36556276
Full Text :
https://doi.org/10.3390/jpm12122056