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Integrative analysis deciphers the heterogeneity of cancer-associated fibroblast and implications on clinical outcomes in ovarian cancers.
- Source :
-
Computational and structural biotechnology journal [Comput Struct Biotechnol J] 2022 Nov 14; Vol. 20, pp. 6403-6411. Date of Electronic Publication: 2022 Nov 14 (Print Publication: 2022). - Publication Year :
- 2022
-
Abstract
- Accumulating evidence has recognized that cancer-associated fibroblasts (CAFs) are major players in the desmoplastic stroma of ovarian cancer, modulating tumor progression and therapeutic response. However, it is unclear regarding the signatures of CAFs could be utilized to predict the clinical outcomes of ovarian cancer patients. To fill in this gap, we explored the intratumoral compartment of ovarian cancer by analyzing the single-cell RNA-sequencing (scRNA-seq) datasets of ovarian carcinoma samples, and identified two distinct CAFs (tumor-promoting CAF&#95;c1 subtype and myofibroblasts-like CAF&#95;c2 subtype). The clinical significance of CAF subtypes was further validated in The Cancer Genomics Atlas (TCGA) database and other independent immunotherapy response datasets, and the results revealed that the patients with a higher expression of CAF&#95;c1 signatures had a worse prognosis and showed a tendency of resistance to immunotherapy. This work uncovered the signatures of the CAF&#95;c1 subtype that could serve as a novel prognostic indicator and predictive marker for immunotherapy.<br />Competing Interests: The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Yixuan Huang and Xinlei Zhang are employees of Beijing Cloudna Technology Co., Ltd., and the other authors declare no competing financial interests.<br /> (© 2022 The Author(s).)
Details
- Language :
- English
- ISSN :
- 2001-0370
- Volume :
- 20
- Database :
- MEDLINE
- Journal :
- Computational and structural biotechnology journal
- Publication Type :
- Academic Journal
- Accession number :
- 36420154
- Full Text :
- https://doi.org/10.1016/j.csbj.2022.11.025