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Comparative transcriptomics and bioinformatics analysis of genes related to photosynthesis in Eucalyptus camaldulensis .

Authors :
Zhan N
Huang L
Wang Z
Xie Y
Shang X
Liu G
Wu Z
Source :
PeerJ [PeerJ] 2022 Nov 11; Vol. 10, pp. e14351. Date of Electronic Publication: 2022 Nov 11 (Print Publication: 2022).
Publication Year :
2022

Abstract

The timber species Eucalyptus camaldulensis is one of the most important in southern China. Therefore, it is essential to understand the photosynthetic pattern in eucalyptus leaves. In the present study, eighteen photosynthesis-related genes were analyzed using bioinformatics methods. The results indicated that there were ten differentially expressed ribose-5-phosphate isomerase genes ( RPI ), and six of them were up-regulated in the mature leaves compared to the young leaves, while others were down-regulated. The differential expression of four rubisco methyltransferase genes ( RBCMT ) were observed. Two of them were up-regulated, while two were down-regulated in mature leaves compared to young leaves. Furthermore, two ribulose-phosphate-3-epimerase genes ( RPE ) were up-regulated in the mature leaves compared to the young leaves. In contrast, two genes involved in triosephosphate isomerase (TIM) were down-regulated in mature leaves compared with young leaves. The current study provides basic information about the transcriptome of E. camaldulensis and lays a foundation for further research in developing and utilizing important photosynthetic genes.<br />Competing Interests: The authors declare there are no competing interests.<br /> (©2022 Zhan et al.)

Details

Language :
English
ISSN :
2167-8359
Volume :
10
Database :
MEDLINE
Journal :
PeerJ
Publication Type :
Academic Journal
Accession number :
36389400
Full Text :
https://doi.org/10.7717/peerj.14351