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Constructing, validating, and updating machine learning models to predict survival in children with Ebola Virus Disease.

Authors :
Genisca AE
Butler K
Gainey M
Chu TC
Huang L
Mbong EN
Kennedy SB
Laghari R
Nganga F
Muhayangabo RF
Vaishnav H
Perera SM
Adeniji M
Levine AC
Michelow IC
Colubri A
Source :
PLoS neglected tropical diseases [PLoS Negl Trop Dis] 2022 Oct 12; Vol. 16 (10), pp. e0010789. Date of Electronic Publication: 2022 Oct 12 (Print Publication: 2022).
Publication Year :
2022

Abstract

Background: Ebola Virus Disease (EVD) causes high case fatality rates (CFRs) in young children, yet there are limited data focusing on predicting mortality in pediatric patients. Here we present machine learning-derived prognostic models to predict clinical outcomes in children infected with Ebola virus.<br />Methods: Using retrospective data from the Ebola Data Platform, we investigated children with EVD from the West African EVD outbreak in 2014-2016. Elastic net regularization was used to create a prognostic model for EVD mortality. In addition to external validation with data from the 2018-2020 EVD epidemic in the Democratic Republic of the Congo (DRC), we updated the model using selected serum biomarkers.<br />Findings: Pediatric EVD mortality was significantly associated with younger age, lower PCR cycle threshold (Ct) values, unexplained bleeding, respiratory distress, bone/muscle pain, anorexia, dysphagia, and diarrhea. These variables were combined to develop the newly described EVD Prognosis in Children (EPiC) predictive model. The area under the receiver operating characteristic curve (AUC) for EPiC was 0.77 (95% CI: 0.74-0.81) in the West Africa derivation dataset and 0.76 (95% CI: 0.64-0.88) in the DRC validation dataset. Updating the model with peak aspartate aminotransferase (AST) or creatinine kinase (CK) measured within the first 48 hours after admission increased the AUC to 0.90 (0.77-1.00) and 0.87 (0.74-1.00), respectively.<br />Conclusion: The novel EPiC prognostic model that incorporates clinical information and commonly used biochemical tests, such as AST and CK, can be used to predict mortality in children with EVD.<br />Competing Interests: The authors have declared that no competing interests exist.

Details

Language :
English
ISSN :
1935-2735
Volume :
16
Issue :
10
Database :
MEDLINE
Journal :
PLoS neglected tropical diseases
Publication Type :
Academic Journal
Accession number :
36223331
Full Text :
https://doi.org/10.1371/journal.pntd.0010789