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Whole Genome Association Study of the Plasma Metabolome Identifies Metabolites Linked to Cardiometabolic Disease in Black Individuals.

Authors :
Tahir UA
Katz DH
Avila-Pachecho J
Bick AG
Pampana A
Robbins JM
Yu Z
Chen ZZ
Benson MD
Cruz DE
Ngo D
Deng S
Shi X
Zheng S
Eisman AS
Farrell L
Hall ME
Correa A
Tracy RP
Durda P
Taylor KD
Liu Y
Johnson WC
Guo X
Yao J
Chen YI
Manichaikul AW
Ruberg FL
Blaner WS
Jain D
Bouchard C
Sarzynski MA
Rich SS
Rotter JI
Wang TJ
Wilson JG
Clish CB
Natarajan P
Gerszten RE
Source :
Nature communications [Nat Commun] 2022 Aug 22; Vol. 13 (1), pp. 4923. Date of Electronic Publication: 2022 Aug 22.
Publication Year :
2022

Abstract

Integrating genetic information with metabolomics has provided new insights into genes affecting human metabolism. However, gene-metabolite integration has been primarily studied in individuals of European Ancestry, limiting the opportunity to leverage genomic diversity for discovery. In addition, these analyses have principally involved known metabolites, with the majority of the profiled peaks left unannotated. Here, we perform a whole genome association study of 2,291 metabolite peaks (known and unknown features) in 2,466 Black individuals from the Jackson Heart Study. We identify 519 locus-metabolite associations for 427 metabolite peaks and validate our findings in two multi-ethnic cohorts. A significant proportion of these associations are in ancestry specific alleles including findings in APOE, TTR and CD36. We leverage tandem mass spectrometry to annotate unknown metabolites, providing new insight into hereditary diseases including transthyretin amyloidosis and sickle cell disease. Our integrative omics approach leverages genomic diversity to provide novel insights into diverse cardiometabolic diseases.<br /> (© 2022. The Author(s).)

Details

Language :
English
ISSN :
2041-1723
Volume :
13
Issue :
1
Database :
MEDLINE
Journal :
Nature communications
Publication Type :
Academic Journal
Accession number :
35995766
Full Text :
https://doi.org/10.1038/s41467-022-32275-3