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VOC-DL: Deep learning prediction model for COVID-19 based on VOC virus variants.

Authors :
Liao Z
Song Y
Ren S
Song X
Fan X
Liao Z
Source :
Computer methods and programs in biomedicine [Comput Methods Programs Biomed] 2022 Sep; Vol. 224, pp. 106981. Date of Electronic Publication: 2022 Jun 30.
Publication Year :
2022

Abstract

Background and Objective: The ever-mutating COVID-19 has infected billions of people worldwide and seriously affected the stability of human society and the world economic development. Therefore, it is essential to make long-term and short-term forecasts for COVID-19. However, the pandemic situation in different countries and regions may be dominated by different virus variants, and the transmission capacity of different virus variants diversifies. Therefore, there is a need to develop a predictive model that can incorporate mutational information to make reasonable predictions about the current pandemic situation.<br />Methods: This paper proposes a deep learning prediction framework, VOC-DL, based on Variants Of Concern (VOC). The framework uses slope feature method to process the time series dataset containing VOC variant information, and uses VOC-LSTM, VOC-GRU and VOC-BILSTM prediction models included in the framework to predict the daily newly confirmed cases.<br />Results: We analyzed daily newly confirmed cases in Italy, South Korea, Russia, Japan and India from April 14th, 2021 to July 3rd, 2021. The experimental results show that all VOC-DL models proposed in this paper can accurately predict the pandemic trend in the medium and long term, and VOC-LSTM model has the best prediction performance, with the highest average determination coefficient R2 of 96.83% in five nations' datasets. The overall prediction has robustness.<br />Conclusions: The experimental results show that VOC-LSTM is the best predictor for such a series of data and has higher prediction accuracy in the long run. At the same time, our VOC-DL framework combining VOC variants has reference significance for predicting other variants in the future.<br />Competing Interests: Declaration of Competing Interest The authors declare that there is no conflict of interests.<br /> (Copyright © 2022. Published by Elsevier B.V.)

Details

Language :
English
ISSN :
1872-7565
Volume :
224
Database :
MEDLINE
Journal :
Computer methods and programs in biomedicine
Publication Type :
Academic Journal
Accession number :
35863125
Full Text :
https://doi.org/10.1016/j.cmpb.2022.106981