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QTLViewer: an interactive webtool for genetic analysis in the Collaborative Cross and Diversity Outbred mouse populations.

Authors :
Vincent M
Gerdes Gyuricza I
Keele GR
Gatti DM
Keller MP
Broman KW
Churchill GA
Source :
G3 (Bethesda, Md.) [G3 (Bethesda)] 2022 Jul 29; Vol. 12 (8).
Publication Year :
2022

Abstract

The Collaborative Cross and the Diversity Outbred mouse populations are related multiparental populations, derived from the same 8 isogenic founder strains. They carry >50 M known genetic variants, which makes them ideal tools for mapping genetic loci that regulate phenotypes, including physiological and molecular traits. Mapping quantitative trait loci requires statistical and computational training, which can present a barrier to access for some researchers. The QTLViewer software allows users to graphically explore Collaborative Cross and Diversity Outbred quantitative trait locus mapping and related analyses performed through the R/qtl2 package. Additionally, the QTLViewer website serves as a repository for published Collaborative Cross and Diversity Outbred studies, increasing the accessibility of these genetic resources to the broader scientific community.<br /> (© The Author(s) 2022. Published by Oxford University Press on behalf of Genetics Society of America.)

Details

Language :
English
ISSN :
2160-1836
Volume :
12
Issue :
8
Database :
MEDLINE
Journal :
G3 (Bethesda, Md.)
Publication Type :
Academic Journal
Accession number :
35703938
Full Text :
https://doi.org/10.1093/g3journal/jkac146