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Microvirga roseola sp. nov. and Microvirga lenta sp. nov., isolated from Taklamakan Desert soil.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2022 Jun; Vol. 72 (6). - Publication Year :
- 2022
-
Abstract
- Two Gram-negative, rod-shaped, non-spore-forming bacteria, designated SM9 <superscript>T</superscript> and SM2 <superscript>T</superscript> , were isolated from Taklamakan Desert soil samples. Phylogenetic analysis based on the 16S rRNA gene sequences showed that strains SM9 <superscript>T</superscript> and SM2 <superscript>T</superscript> had the highest sequence similarity to the type strains Microvirga indica BCRC 80972 <superscript>T</superscript> and Microvirga soli NBRC 112417 <superscript>T</superscript> with similarity values of 98.2 and 97.7 %, respectively, and Microvirga was among the predominant genera in the desert soil. The draft genomes of these two strains were 4.56 Mbp (SM9 <superscript>T</superscript> ) and 5.08 Mbp (SM2 <superscript>T</superscript> ) long with 65.1 mol% (SM9 <superscript>T</superscript> ) and 63.5 mol% (SM2 <superscript>T</superscript> ) G+C content. To adapt to the desert environment, these two strains possessed pathways for the synthesis of stress metabolite trehalose. The major fatty acids (>5 %) included C <subscript>18 : 1</subscript> ω9 c in SM2 <superscript>T</superscript> , but C <subscript>16 : 0</subscript> , C <subscript>18 : 0</subscript> and C <subscript>19 : 0</subscript> cyclo ω8 c in SM9 <superscript>T</superscript> , while the major menaquinone was ubiquinone 10 in both strains. The major polar lipids of SM9 <superscript>T</superscript> and SM2 <superscript>T</superscript> were phosphatidylglycerol, phosphatidylethanolamine and phospholipid. The average nucleotide identity and digital DNA-DNA hybridization results further indicated that strains SM9 <superscript>T</superscript> and SM2 <superscript>T</superscript> were distinguished from phylogenetically related species and represented two novel species within the genus Microvirga , for which the names Microvirga roseola sp. nov. (type strain SM2 <superscript>T</superscript> =KCTC 72792 <superscript>T</superscript> =CGMCC 1.17776 <superscript>T</superscript> ) and Microvirga lenta sp. nov. (type strain SM9 <superscript>T</superscript> =KCTC 82729 <superscript>T</superscript> =CCTCC AB 2021131 <superscript>T</superscript> ) are proposed.
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 72
- Issue :
- 6
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 35666677
- Full Text :
- https://doi.org/10.1099/ijsem.0.005409