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Genome-wide analysis provides genetic evidence that ACE2 influences COVID-19 risk and yields risk scores associated with severe disease.

Authors :
Horowitz JE
Kosmicki JA
Damask A
Sharma D
Roberts GHL
Justice AE
Banerjee N
Coignet MV
Yadav A
Leader JB
Marcketta A
Park DS
Lanche R
Maxwell E
Knight SC
Bai X
Guturu H
Sun D
Baltzell A
Kury FSP
Backman JD
Girshick AR
O'Dushlaine C
McCurdy SR
Partha R
Mansfield AJ
Turissini DA
Li AH
Zhang M
Mbatchou J
Watanabe K
Gurski L
McCarthy SE
Kang HM
Dobbyn L
Stahl E
Verma A
Sirugo G
Ritchie MD
Jones M
Balasubramanian S
Siminovitch K
Salerno WJ
Shuldiner AR
Rader DJ
Mirshahi T
Locke AE
Marchini J
Overton JD
Carey DJ
Habegger L
Cantor MN
Rand KA
Hong EL
Reid JG
Ball CA
Baras A
Abecasis GR
Ferreira MAR
Source :
Nature genetics [Nat Genet] 2022 Apr; Vol. 54 (4), pp. 382-392. Date of Electronic Publication: 2022 Mar 03.
Publication Year :
2022

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) enters human host cells via angiotensin-converting enzyme 2 (ACE2) and causes coronavirus disease 2019 (COVID-19). Here, through a genome-wide association study, we identify a variant (rs190509934, minor allele frequency 0.2-2%) that downregulates ACE2 expression by 37% (P = 2.7 × 10 <superscript>-</superscript> <superscript>8</superscript> ) and reduces the risk of SARS-CoV-2 infection by 40% (odds ratio = 0.60, P = 4.5 × 10 <superscript>-</superscript> <superscript>13</superscript> ), providing human genetic evidence that ACE2 expression levels influence COVID-19 risk. We also replicate the associations of six previously reported risk variants, of which four were further associated with worse outcomes in individuals infected with the virus (in/near LZTFL1, MHC, DPP9 and IFNAR2). Lastly, we show that common variants define a risk score that is strongly associated with severe disease among cases and modestly improves the prediction of disease severity relative to demographic and clinical factors alone.<br /> (© 2022. The Author(s).)

Details

Language :
English
ISSN :
1546-1718
Volume :
54
Issue :
4
Database :
MEDLINE
Journal :
Nature genetics
Publication Type :
Academic Journal
Accession number :
35241825
Full Text :
https://doi.org/10.1038/s41588-021-01006-7