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Defining the interactomes of proteins involved in cytoskeletal dynamics using high-throughput proximity-dependent biotinylation in cellulo .

Authors :
Nahlé S
Quirion L
Boulais J
Bagci H
Faubert D
Gingras AC
Côté JF
Source :
STAR protocols [STAR Protoc] 2022 Jan 10; Vol. 3 (1), pp. 101075. Date of Electronic Publication: 2022 Jan 10 (Print Publication: 2022).
Publication Year :
2022

Abstract

Proximity-dependent biotinylation (BioID) screens are excellent tools to capture in cellulo interactomes for a large variety of baits, including transient and weak affinity interactions, as well as localization-specific proximity components, which are much harder to detect with conventional approaches. Here, we describe the major starting steps and a detailed protocol on how to perform BioID in mammalian cells. We also describe the mass spectrometry procedure and the bioinformatics pipeline for the data analysis. For complete details on the use and execution of this profile, please refer to Bagci et al. (2020).<br />Competing Interests: The authors declare no competing interests.<br /> (© 2021 The Authors.)

Details

Language :
English
ISSN :
2666-1667
Volume :
3
Issue :
1
Database :
MEDLINE
Journal :
STAR protocols
Publication Type :
Academic Journal
Accession number :
35036956
Full Text :
https://doi.org/10.1016/j.xpro.2021.101075