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New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources.

Authors :
Engel SR
Wong ED
Nash RS
Aleksander S
Alexander M
Douglass E
Karra K
Miyasato SR
Simison M
Skrzypek MS
Weng S
Cherry JM
Source :
Genetics [Genetics] 2022 Apr 04; Vol. 220 (4).
Publication Year :
2022

Abstract

Saccharomyces cerevisiae is used to provide fundamental understanding of eukaryotic genetics, gene product function, and cellular biological processes. Saccharomyces Genome Database (SGD) has been supporting the yeast research community since 1993, serving as its de facto hub. Over the years, SGD has maintained the genetic nomenclature, chromosome maps, and functional annotation, and developed various tools and methods for analysis and curation of a variety of emerging data types. More recently, SGD and six other model organism focused knowledgebases have come together to create the Alliance of Genome Resources to develop sustainable genome information resources that promote and support the use of various model organisms to understand the genetic and genomic bases of human biology and disease. Here we describe recent activities at SGD, including the latest reference genome annotation update, the development of a curation system for mutant alleles, and new pages addressing homology across model organisms as well as the use of yeast to study human disease.<br /> (© The Author(s) 2021. Published by Oxford University Press on behalf of Genetics Society of America.)

Details

Language :
English
ISSN :
1943-2631
Volume :
220
Issue :
4
Database :
MEDLINE
Journal :
Genetics
Publication Type :
Academic Journal
Accession number :
34897464
Full Text :
https://doi.org/10.1093/genetics/iyab224