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Micro-Meta App: an interactive tool for collecting microscopy metadata based on community specifications.

Authors :
Rigano A
Ehmsen S
Öztürk SU
Ryan J
Balashov A
Hammer M
Kirli K
Boehm U
Brown CM
Bellve K
Chambers JJ
Cosolo A
Coleman RA
Faklaris O
Fogarty KE
Guilbert T
Hamacher AB
Itano MS
Keeley DP
Kunis S
Lacoste J
Laude A
Ma WY
Marcello M
Montero-Llopis P
Nelson G
Nitschke R
Pimentel JA
Weidtkamp-Peters S
Park PJ
Alver BH
Grunwald D
Strambio-De-Castillia C
Source :
Nature methods [Nat Methods] 2021 Dec; Vol. 18 (12), pp. 1489-1495. Date of Electronic Publication: 2021 Dec 03.
Publication Year :
2021

Abstract

For quality, interpretation, reproducibility and sharing value, microscopy images should be accompanied by detailed descriptions of the conditions that were used to produce them. Micro-Meta App is an intuitive, highly interoperable, open-source software tool that was developed in the context of the 4D Nucleome (4DN) consortium and is designed to facilitate the extraction and collection of relevant microscopy metadata as specified by the recent 4DN-BINA-OME tiered-system of Microscopy Metadata specifications. In addition to substantially lowering the burden of quality assurance, the visual nature of Micro-Meta App makes it particularly suited for training purposes.<br /> (© 2021. The Author(s).)

Details

Language :
English
ISSN :
1548-7105
Volume :
18
Issue :
12
Database :
MEDLINE
Journal :
Nature methods
Publication Type :
Academic Journal
Accession number :
34862503
Full Text :
https://doi.org/10.1038/s41592-021-01315-z