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Manipulating cellular microRNAs and analyzing high-dimensional gene expression data using machine learning workflows.
- Source :
-
STAR protocols [STAR Protoc] 2021 Oct 23; Vol. 2 (4), pp. 100910. Date of Electronic Publication: 2021 Oct 23 (Print Publication: 2021). - Publication Year :
- 2021
-
Abstract
- MicroRNAs (miRNAs) are elements of the gene regulatory network and manipulating their abundance is essential toward elucidating their role in patho-physiological conditions. We present a detailed workflow that identifies important miRNAs using a machine learning algorithm. We then provide optimized techniques to validate the identified miRNAs through over-expression/loss-of-function studies. Overall, these protocols apply to any field in biology where high-dimensional data are produced. For complete details on the use and execution of this protocol, please refer to Wong et al. (2021a).<br />Competing Interests: The authors declare no competing interests.<br /> (© 2021.)
Details
- Language :
- English
- ISSN :
- 2666-1667
- Volume :
- 2
- Issue :
- 4
- Database :
- MEDLINE
- Journal :
- STAR protocols
- Publication Type :
- Academic Journal
- Accession number :
- 34746868
- Full Text :
- https://doi.org/10.1016/j.xpro.2021.100910