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Photobacterium arenosum sp. nov., isolated from marine sediment sand.

Authors :
Weerawongwiwat V
Yoon S
Kim JH
Yoon JH
Lee JS
Sukhoom A
Kim W
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 Oct; Vol. 71 (10).
Publication Year :
2021

Abstract

A Gram-stain-negative, aerobic, motile, short rod-shaped, catalase-negative and oxidase-positive bacterium, strain CAU 1568 <superscript>T</superscript> , was isolated from marine sediment sand sampled at Sido Island in the Republic of Korea. The optimum conditions for growth were at 25-30 °C, at pH 6.5-8.5 and with 0-4.0 % (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain CAU 1568 <superscript>T</superscript> was a member of the genus Photobacterium with high similarity to Photobacterium salinisoli JCM 30852 <superscript>T</superscript> (97.7 %), Photobacterium halotolerans KACC 17089 <superscript>T</superscript> (97.3 %) and Photobacterium galatheae LMG F28894 <superscript>T</superscript> (97.3 %). The predominant cellular fatty acids were C <subscript>16 : 0</subscript> , summed feature 3 (C <subscript>16 : 1</subscript>  ω 6 c and/or C <subscript>16 : 1</subscript>  ω 7 c ) and summed feature 8 (C <subscript>18 : 1</subscript>  ω 7 c and/or C <subscript>18 : 1</subscript>  ω 6 c ), with Q-8 as the major of isoprenoid quinone. The polar lipid profile consisted of diphosphatidylglycerol, phosphatidylglycerols, phosphatidylcholine, phosphatidylethanolamine, phospholipid, two aminophospholipids and three unidentified lipids. The whole genome size of strain CAU 1568 <superscript>T</superscript> was 4.8 Mb with 50.1 mol% G+C content; including 38 contigs and 4233 protein-coding genes. These taxonomic data support CAU 1568 <superscript>T</superscript> as representing a novel Photobacterium species, for which the name Photobacterium arenosum sp. nov. is proposed. The type strain of this novel species is CAU 1568 <superscript>T</superscript> (=KCTC 82404 <superscript>T</superscript> =MCCC 1K05668 <superscript>T</superscript> ).

Details

Language :
English
ISSN :
1466-5034
Volume :
71
Issue :
10
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
34605765
Full Text :
https://doi.org/10.1099/ijsem.0.005034