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Oceaniferula marina gen.nov., sp.nov., an anti-fluoroquinolone bacterium isolated from marine sediment.

Authors :
Jin CB
Feng X
Zou QH
Ye MQ
Du ZJ
Source :
Antonie van Leeuwenhoek [Antonie Van Leeuwenhoek] 2021 Nov; Vol. 114 (11), pp. 1855-1865. Date of Electronic Publication: 2021 Sep 01.
Publication Year :
2021

Abstract

A Gram-stain-negative, aerobic, rod-shaped, non-gliding and non-motile bacterium designated as N1E253 <superscript>T</superscript> , was isolated from marine sediments collected from the coast of Weihai, PR China. N1E253 <superscript>T</superscript> was found to grow at pH 7.0-9.0 (optimum, pH 7.5), 15-37 °C (optimum, 30 °C) in the presence of 1.5-5.0% (w/v) NaCl (optimum, 3.0%). The major polar lipids of strain N1E253 <superscript>T</superscript> were phosphatidylethanolamine, diphosphatidylglycerol and one unidentified phospholipid. The sole respiratory quinone was MK-9. The major cellular fatty acids (> 10.0%) were iso-C <subscript>14: 0</subscript> , C <subscript>16: 0</subscript> and Summed Feature 3 (C <subscript>16:1</subscript> ω7c and/or C <subscript>16:1</subscript> ω6c). The result of the 16S rRNA gene sequence analysis confirmed the affiliation of this novel isolate to the family Verrucomicrobiaceae, with Persicirhabdus sediminis KCTC 22039 <superscript> T</superscript> being its closest relative with 92.1% sequence similarity. Genome sequencing revealed a genome size of 5,073,947 bp, DNA G + C content of 52.0% and two protein-coding genes related to the resistance of fluoroquinolones. Based on physiological, genomic, biochemical and chemotaxonomic characteristics, we propose that strain N1E253 <superscript>T</superscript> represents a novel species of a novel genus within the family Verrucomicrobiaceae, for which the name Oceaniferula marina gen. nov., sp. nov. is proposed. The type strain is N1E253 <superscript>T</superscript> (= KCTC 72800 <superscript> T</superscript>  = MCCC 1H00405 <superscript>T</superscript> ).<br /> (© 2021. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)

Details

Language :
English
ISSN :
1572-9699
Volume :
114
Issue :
11
Database :
MEDLINE
Journal :
Antonie van Leeuwenhoek
Publication Type :
Academic Journal
Accession number :
34468960
Full Text :
https://doi.org/10.1007/s10482-021-01645-0