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An R -Package for the Deconvolution and Integration of 1D NMR Data: MetaboDecon1D.

Authors :
Häckl M
Tauber P
Schweda F
Zacharias HU
Altenbuchinger M
Oefner PJ
Gronwald W
Source :
Metabolites [Metabolites] 2021 Jul 13; Vol. 11 (7). Date of Electronic Publication: 2021 Jul 13.
Publication Year :
2021

Abstract

NMR spectroscopy is a widely used method for the detection and quantification of metabolites in complex biological fluids. However, the large number of metabolites present in a biological sample such as urine or plasma leads to considerable signal overlap in one-dimensional NMR spectra, which in turn hampers both signal identification and quantification. As a consequence, we have developed an easy to use R -package that allows the fully automated deconvolution of overlapping signals in the underlying Lorentzian line-shapes. We show that precise integral values are computed, which are required to obtain both relative and absolute quantitative information. The algorithm is independent of any knowledge of the corresponding metabolites, which also allows the quantitative description of features of yet unknown identity.

Details

Language :
English
ISSN :
2218-1989
Volume :
11
Issue :
7
Database :
MEDLINE
Journal :
Metabolites
Publication Type :
Academic Journal
Accession number :
34357346
Full Text :
https://doi.org/10.3390/metabo11070452