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Flavobacterium muglaense sp. nov. isolated from internal organs of apparently healthy rainbow trout.

Authors :
Duman M
Ay H
Altun S
Sahin N
Saticioglu IB
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 Jul; Vol. 71 (7).
Publication Year :
2021

Abstract

Two yellow-pigmented isolates, F-60 <superscript>T</superscript> and F-392, were isolated from the internal organs of an apparently healthy rainbow trout ( Oncorhynchus mykiss ). The strains were identified as members of the genus Flavobacterium based on the results of 16S rRNA gene sequence analysis. Strains F-60 <superscript>T</superscript> and F-392 had the highest 16S rRNA gene sequence identity level of 97.4 % to the type strain of Flavobacterium crassostreae LPB0076 <superscript>T</superscript> . A polyphasic taxonomic approach including phenotypic, chemotaxonomic and genomic characterization was employed to ascertain the taxonomic position of the strains within the genus Flavobacterium . Digital DNA-DNA hybridization (dDDH) and average nucleotide identity based on blast (ANIb) values for strains F-60 <superscript>T</superscript> and F-392 were calculated as 100 %. However, dDDH and ANI analyses between the strains and their close neighbours confirmed that both strains represent a novel species in the genus Flavobacterium . The strains shared the highest dDDH and ANIb levels of 23.3 and 77.9%, respectively, with the type strain of Flavobacterium frigidarium DSM 17623 <superscript>T</superscript> while those values for F. crassostreae LPB0076 <superscript>T</superscript> were obtained as 21.4-21.5 % and 76.3 %. The DNA G+C content of the strains was 34.5 mol%. Chemotaxonomic and phylogenomic analyses of these isolates confirmed that both strains are representatives of a novel species for which the name Flavobacterium muglaense sp. nov. is proposed, with F-60 <superscript>T</superscript> as the type strain (=JCM 34196 <superscript>T</superscript> =KCTC 82256 <superscript>T</superscript> ).

Details

Language :
English
ISSN :
1466-5034
Volume :
71
Issue :
7
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
34296991
Full Text :
https://doi.org/10.1099/ijsem.0.004903