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Synthesis, molecular docking, and in silico ADMET studies of 4-benzyl-1-(2,4,6-trimethyl-benzyl)-piperidine: Potential Inhibitor of SARS-CoV2.
- Source :
-
Bioorganic chemistry [Bioorg Chem] 2021 Jul; Vol. 112, pp. 104967. Date of Electronic Publication: 2021 May 05. - Publication Year :
- 2021
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Abstract
- Nowadays, over 200 countries face a wellbeing emergency because of epidemiological disease COVID-19 caused by the SARS-CoV-2 virus. It will cause a very high effect on the world's economy and the worldwide health sector. The present work is an investigation of the newly synthesized 4-benzyl-1-(2,4,6-trimethyl-benzyl)-piperidine (M1BZP) molecule's inhibitory potential against important protein targets of SARS-CoV-2 using computational approaches. M1BZP crystallizes in monoclinic type with P1211 space group. For the title compound M1BZP, spectroscopic characterization like <superscript>1</superscript> H NMR, <superscript>13</superscript> C NMR, FTIR, were carried out. The geometry of the compound had been optimized by the DFT method and its results were compared with the X-ray diffraction data. The calculated energies for the Highest Occupied Molecular Orbital (HOMO) and the Lowest Unoccupied Molecular Orbital (LUMO) showed the stability and reactivity of the title compound. Intermolecular interactions in the crystal network were determined using Hirshfeld surface analyses. The molecular electrostatic potential (MEP) picture was drawn using the same level of theory to visualize the chemical reactivity and charge distribution on the molecule. Molecular docking study performed for the synthesized compound revealed an efficient interaction with the COVID-19 protease and resulted in good activities. We hope the present study would help workers in the field to develop potential vaccines and therapeutics against the novel coronavirus. Virtual ADME studies were carried out as well and a relationship between biological, electronic, and physicochemical qualifications of the target compound was determined. Toxicity prediction by computational technique for the title compound was also carried out.<br /> (Copyright © 2021 Elsevier Inc. All rights reserved.)
- Subjects :
- Adenosine Monophosphate analogs & derivatives
Adenosine Monophosphate chemistry
Adenosine Monophosphate metabolism
Alanine analogs & derivatives
Alanine chemistry
Alanine metabolism
Antiviral Agents chemical synthesis
Antiviral Agents chemistry
Binding Sites
COVID-19 pathology
COVID-19 virology
Crystallography, X-Ray
Density Functional Theory
Half-Life
Humans
Molecular Conformation
Molecular Docking Simulation
Piperidines chemical synthesis
Piperidines metabolism
SARS-CoV-2 isolation & purification
Spike Glycoprotein, Coronavirus metabolism
Viral Matrix Proteins antagonists & inhibitors
Viral Matrix Proteins metabolism
Antiviral Agents metabolism
Piperidines chemistry
SARS-CoV-2 metabolism
Spike Glycoprotein, Coronavirus antagonists & inhibitors
Subjects
Details
- Language :
- English
- ISSN :
- 1090-2120
- Volume :
- 112
- Database :
- MEDLINE
- Journal :
- Bioorganic chemistry
- Publication Type :
- Academic Journal
- Accession number :
- 33975232
- Full Text :
- https://doi.org/10.1016/j.bioorg.2021.104967