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Ten-eleven translocation protein 1 modulates medulloblastoma progression.
- Source :
-
Genome biology [Genome Biol] 2021 Apr 29; Vol. 22 (1), pp. 125. Date of Electronic Publication: 2021 Apr 29. - Publication Year :
- 2021
-
Abstract
- Background: Medulloblastoma (MB) is the most common malignant pediatric brain tumor that originates in the cerebellum and brainstem. Frequent somatic mutations and deregulated expression of epigenetic regulators in MB highlight the substantial role of epigenetic alterations. 5-hydroxymethylcytosine (5hmC) is a highly abundant cytosine modification in the developing cerebellum and is regulated by ten-eleven translocation (TET) enzymes.<br />Results: We investigate the alterations of 5hmC and TET enzymes in MB and their significance to cerebellar cancer formation. We show total abundance of 5hmC is reduced in MB, but identify significant enrichment of MB-specific 5hmC marks at regulatory regions of genes implicated in stem-like properties and Nanog-binding motifs. While TET1 and TET2 levels are high in MBs, only knockout of Tet1 in the smoothened (SmoA1) mouse model attenuates uncontrolled proliferation, leading to a favorable prognosis. The pharmacological Tet1 inhibition reduces cell viability and platelet-derived growth factor signaling pathway-associated genes.<br />Conclusions: These results together suggest a potential key role of 5hmC and indicate an oncogenic nature for TET1 in MB tumorigenesis, suggesting it as a potential therapeutic target for MBs.
- Subjects :
- 5-Methylcytosine analogs & derivatives
Animals
Biomarkers, Tumor
Computational Biology methods
CpG Islands
DNA Methylation
Databases, Nucleic Acid
Disease Models, Animal
Disease Progression
Epigenesis, Genetic
Gene Expression Profiling
Gene Expression Regulation, Neoplastic
Humans
Medulloblastoma mortality
Medulloblastoma pathology
Mice
Mice, Transgenic
Nucleotide Motifs
Prognosis
Disease Susceptibility
Medulloblastoma etiology
Medulloblastoma metabolism
Mixed Function Oxygenases genetics
Mixed Function Oxygenases metabolism
Proto-Oncogene Proteins genetics
Proto-Oncogene Proteins metabolism
Subjects
Details
- Language :
- English
- ISSN :
- 1474-760X
- Volume :
- 22
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Genome biology
- Publication Type :
- Academic Journal
- Accession number :
- 33926529
- Full Text :
- https://doi.org/10.1186/s13059-021-02352-9