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Sporofaciens musculi gen. nov., sp. nov., a novel bacterium isolated from the caecum of an obese mouse.

Authors :
Rasmussen TS
Streidl T
Hitch TCA
Wortmann E
Deptula P
Kofoed MVW
Riedel T
Neumann-Schaal M
Hansen M
Nielsen DS
Clavel T
Vogensen FK
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2019 Jun; Vol. 71 (3). Date of Electronic Publication: 2021 Jan 29.
Publication Year :
2019

Abstract

A bacterial strain, designated WCA-9-b2 <superscript>T</superscript> , was isolated from the caecal content of an 18-week-old obese C57BL/6NTac male mouse. According to phenotypic analyses, the isolate was rod-shaped, strictly anaerobic, spore-forming, non-motile and Gram-stain-positive, under the conditions tested. Colonies were irregular and non-pigmented. Analysis of the 16S rRNA gene sequence indicated that the isolate belonged to the order Clostridiales with Dorea longicatena ATCC 27755 <superscript>T</superscript> (94.9 % sequence identity), Ruminococcus gnavus ATCC 29149 <superscript>T</superscript> (94.8%) and Clostridium scindens ATCC 35704 <superscript>T</superscript> (94.3%) being the closest relatives. Whole genome sequencing showed an average nucleotide identity <74.23 %, average amino acid identity <64.52-74.67 % and percentage of conserved proteins values <50 % against the nine closest relatives ( D. longicatena , Ruminococcus gnavus , C. scindens , Dorea formicigenerans , Ruminococcus lactaris , Clostridium hylemonae , Merdimonas faecis , Faecalicatena contorta and Faecalicatena fissicatena ). The genome-based G+C content of genomic DNA was 44.4 mol%. The major cellular fatty acids were C <subscript>16 : 0</subscript> (24.5%), C <subscript>18 : 1</subscript> cis 9 (19.8 %), C <subscript>16 : 0</subscript> DMA (11.7%), C <subscript>18 : 0</subscript> (8.4%) and C <subscript>14 : 0</subscript> (6.6%). Respiratory quinones were not detected. The predominant metabolic end products of glucose fermentation were acetate and succinate. Production of CO <subscript>2</subscript> and H <subscript>2</subscript> were detected. Based on these data, we propose that strain WCA-9-b2 <superscript>T</superscript> represents a novel species within a novel genus, for which the name Sporofaciens musculi gen. nov., sp. nov. is proposed. The type strain is WCA-9-b2 <superscript>T</superscript> (=DSM 106039 <superscript>T</superscript> =CECT 30156 <superscript>T</superscript> ).

Details

Language :
English
ISSN :
1466-5034
Volume :
71
Issue :
3
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
33512312
Full Text :
https://doi.org/10.1099/ijsem.0.004673