Back to Search Start Over

The complete chloroplast genome sequence of Ligularia fischeri (Ledeb.) Turcz. (Asteraceae).

Authors :
Lee J
Lee H
Lee SC
Sung SH
Kang JH
Lee TJ
Yang TJ
Source :
Mitochondrial DNA. Part B, Resources [Mitochondrial DNA B Resour] 2016 Feb 01; Vol. 1 (1), pp. 4-5. Date of Electronic Publication: 2016 Feb 01.
Publication Year :
2016

Abstract

We characterized the complete chloroplast genome sequence of Ligularia fischeri , a collection from Halla Mountain in Jeju Island, Korea. The plants are utilized as edible functional plant species harbouring useful antioxidant compounds in family Asteraceae. De novo assembly with whole genome sequencing data of L. fischeri completed the chloroplast genome of 151 133 bp long, which included two inverted repeats (IRs) blocks of 24 831 bp, separated by the large single-copy block of 83 238 bp and small single-copy block of 18 233 bp. The genome encoded 113 genes consisting of 80 protein-coding genes, 29 tRNA genes and 4 rRNA genes. Phylogenetic analysis with protein coding gene sequences of reported Asteraceae chloroplast genomes revealed a close relationship of L. fischeri with Jacobaea vulgaris , a weed species world-widely distributed.<br /> (© 2016 The Author(s). Published by Taylor & Francis.)

Details

Language :
English
ISSN :
2380-2359
Volume :
1
Issue :
1
Database :
MEDLINE
Journal :
Mitochondrial DNA. Part B, Resources
Publication Type :
Academic Journal
Accession number :
33473386
Full Text :
https://doi.org/10.1080/23802359.2015.1137793