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Description of Cohnella zeiphila sp. nov., a bacterium isolated from maize callus cultures.

Authors :
Johnson ET
Dowd PF
Skory CD
Dunlap CA
Source :
Antonie van Leeuwenhoek [Antonie Van Leeuwenhoek] 2021 Jan; Vol. 114 (1), pp. 37-44. Date of Electronic Publication: 2021 Jan 03.
Publication Year :
2021

Abstract

A Gram-stain positive, aerobic, motile, rod-shaped bacterium designated as strain CBP-2801 <superscript>T</superscript> was isolated as a contaminant from a culture containing maize callus in Peoria, Illinois, United States. The strain is unique relative to other Cohnella species due to its slow growth and reduced number of sole carbon sources. Phylogenetic analysis using 16S rRNA indicated that strain CBP-2801 <superscript>T</superscript> is a Cohnella bacterium and showed the highest similarity to Cohnella xylanilytica (96.8%). Genome-based phylogeny and genomic comparisons based on average nucleotide identity confirmed the strain to be a novel species of Cohnella. Growth occurs at 15-45 °C (optimum 40 °C), pH 5-7 (optimum pH 6) and with 0-1% NaCl. The predominant fatty acids are anteiso-15:0 and 18:1 ω6c. Genome mining for secondary metabolites identified a putative biosynthetic cluster that encodes for a novel lasso peptide. In addition, this study contributes five new genome assemblies of type strains of Cohnella species, a genus with less than 30% of the type strains sequenced. The DNA G + C content is 58.7 mol %. Based on the phenotypic, phylogenetic and biochemical data strain CBP-2801 <superscript>T</superscript> represents a novel species, for which the name Cohnella zeiphila sp. nov. is proposed. The type strain is CBP-2801 <superscript>T</superscript> (= DSM 111598 = ATCC TSD-230).

Details

Language :
English
ISSN :
1572-9699
Volume :
114
Issue :
1
Database :
MEDLINE
Journal :
Antonie van Leeuwenhoek
Publication Type :
Academic Journal
Accession number :
33392934
Full Text :
https://doi.org/10.1007/s10482-020-01495-2