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Active-Site Controlled, Jahn-Teller Enabled Regioselectivity in Reductive S-C Bond Cleavage of S -Adenosylmethionine in Radical SAM Enzymes.
- Source :
-
Journal of the American Chemical Society [J Am Chem Soc] 2021 Jan 13; Vol. 143 (1), pp. 335-348. Date of Electronic Publication: 2020 Dec 29. - Publication Year :
- 2021
-
Abstract
- Catalysis by canonical radical S -adenosyl-l-methionine (SAM) enzymes involves electron transfer (ET) from [4Fe-4S] <superscript>+</superscript> to SAM, generating an R <subscript>3</subscript> S <superscript>0</superscript> radical that undergoes regioselective homolytic reductive cleavage of the S-C5' bond to generate the 5'-dAdo· radical. However, cryogenic photoinduced S-C bond cleavage has regioselectively yielded either 5'-dAdo· or ·CH <subscript>3</subscript> , and indeed, each of the three SAM S-C bonds can be regioselectively cleaved in an RS enzyme. This diversity highlights a longstanding central question: what controls regioselective homolytic S-C bond cleavage upon SAM reduction? We here provide an unexpected answer, founded on our observation that photoinduced S-C bond cleavage in multiple canonical RS enzymes reveals two enzyme classes: in one, photolysis forms 5'-dAdo·, and in another it forms ·CH <subscript>3</subscript> . The identity of the cleaved S-C bond correlates with SAM ribose conformation but not with positioning and orientation of the sulfonium center relative to the [4Fe-4S] cluster. We have recognized the reduced-SAM R <subscript>3</subscript> S <superscript>0</superscript> radical is a ( <superscript>2</superscript> E ) state with its antibonding unpaired electron in an orbital doublet, which renders R <subscript>3</subscript> S <superscript>0</superscript> Jahn-Teller (JT)-active and therefore subject to vibronically induced distortion. Active-site forces induce a JT distortion that localizes the odd electron in a single priority S-C antibond, which undergoes regioselective cleavage. In photolytic cleavage those forces act through control of the ribose conformation and are transmitted to the sulfur via the S-C5' bond, but during catalysis thermally induced conformational changes that enable ET from a cluster iron generate dominant additional forces that specifically select S-C5' for cleavage. This motion also can explain how 5'-dAdo· subsequently forms the organometallic intermediate Ω.
- Subjects :
- Bacterial Proteins chemistry
Bacterial Proteins radiation effects
Biocatalysis
Catalytic Domain
Clostridium acetobutylicum enzymology
Density Functional Theory
Iron-Sulfur Proteins chemistry
Iron-Sulfur Proteins radiation effects
Light
Models, Chemical
Molecular Structure
Oxidation-Reduction radiation effects
Oxidoreductases Acting on Sulfur Group Donors radiation effects
Photolysis
S-Adenosylmethionine radiation effects
Thermotoga maritima enzymology
Oxidoreductases Acting on Sulfur Group Donors chemistry
S-Adenosylmethionine chemistry
Subjects
Details
- Language :
- English
- ISSN :
- 1520-5126
- Volume :
- 143
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Journal of the American Chemical Society
- Publication Type :
- Academic Journal
- Accession number :
- 33372786
- Full Text :
- https://doi.org/10.1021/jacs.0c10925