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Active-Site Controlled, Jahn-Teller Enabled Regioselectivity in Reductive S-C Bond Cleavage of S -Adenosylmethionine in Radical SAM Enzymes.

Authors :
Impano S
Yang H
Jodts RJ
Pagnier A
Swimley R
McDaniel EC
Shepard EM
Broderick WE
Broderick JB
Hoffman BM
Source :
Journal of the American Chemical Society [J Am Chem Soc] 2021 Jan 13; Vol. 143 (1), pp. 335-348. Date of Electronic Publication: 2020 Dec 29.
Publication Year :
2021

Abstract

Catalysis by canonical radical S -adenosyl-l-methionine (SAM) enzymes involves electron transfer (ET) from [4Fe-4S] <superscript>+</superscript> to SAM, generating an R <subscript>3</subscript> S <superscript>0</superscript> radical that undergoes regioselective homolytic reductive cleavage of the S-C5' bond to generate the 5'-dAdo· radical. However, cryogenic photoinduced S-C bond cleavage has regioselectively yielded either 5'-dAdo· or ·CH <subscript>3</subscript> , and indeed, each of the three SAM S-C bonds can be regioselectively cleaved in an RS enzyme. This diversity highlights a longstanding central question: what controls regioselective homolytic S-C bond cleavage upon SAM reduction? We here provide an unexpected answer, founded on our observation that photoinduced S-C bond cleavage in multiple canonical RS enzymes reveals two enzyme classes: in one, photolysis forms 5'-dAdo·, and in another it forms ·CH <subscript>3</subscript> . The identity of the cleaved S-C bond correlates with SAM ribose conformation but not with positioning and orientation of the sulfonium center relative to the [4Fe-4S] cluster. We have recognized the reduced-SAM R <subscript>3</subscript> S <superscript>0</superscript> radical is a ( <superscript>2</superscript> E ) state with its antibonding unpaired electron in an orbital doublet, which renders R <subscript>3</subscript> S <superscript>0</superscript> Jahn-Teller (JT)-active and therefore subject to vibronically induced distortion. Active-site forces induce a JT distortion that localizes the odd electron in a single priority S-C antibond, which undergoes regioselective cleavage. In photolytic cleavage those forces act through control of the ribose conformation and are transmitted to the sulfur via the S-C5' bond, but during catalysis thermally induced conformational changes that enable ET from a cluster iron generate dominant additional forces that specifically select S-C5' for cleavage. This motion also can explain how 5'-dAdo· subsequently forms the organometallic intermediate Ω.

Details

Language :
English
ISSN :
1520-5126
Volume :
143
Issue :
1
Database :
MEDLINE
Journal :
Journal of the American Chemical Society
Publication Type :
Academic Journal
Accession number :
33372786
Full Text :
https://doi.org/10.1021/jacs.0c10925