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A complete chloroplast genome sequence of Gastrodia elata (Orchidaceae) represents high sequence variation in the species.

Authors :
Park J
Suh Y
Kim S
Source :
Mitochondrial DNA. Part B, Resources [Mitochondrial DNA B Resour] 2020 Jan 14; Vol. 5 (1), pp. 517-519. Date of Electronic Publication: 2020 Jan 14.
Publication Year :
2020

Abstract

Gastrodia elata is a non-photosynthetic saprophytic plant of medicinal use in the oriental countries. We report the second complete chloroplast (cp) genome of G. elata from a sample collected in Korea. The length of cp genome is only 35,180 bp: there is no inverted repeated region and many photosynthesis genes are missing compared to typical angiosperm cp genomes. It includes 20 protein-coding genes, 3 rRNAs, and 5 tRNAs. The overall GC content of the genome was 26.7%. Relatively, high intra-specific variation (457 SNPs and 670 indels) is detected in the species comparing it with other seed plants.<br />Competing Interests: No potential conflict of interest was reported by the authors.<br /> (© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.)

Details

Language :
English
ISSN :
2380-2359
Volume :
5
Issue :
1
Database :
MEDLINE
Journal :
Mitochondrial DNA. Part B, Resources
Publication Type :
Academic Journal
Accession number :
33366628
Full Text :
https://doi.org/10.1080/23802359.2019.1710588