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1 H, 13 C, and 15 N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein.
- Source :
-
Biomolecular NMR assignments [Biomol NMR Assign] 2021 Apr; Vol. 15 (1), pp. 129-135. Date of Electronic Publication: 2020 Dec 03. - Publication Year :
- 2021
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Abstract
- The current outbreak of the highly infectious COVID-19 respiratory disease is caused by the novel coronavirus SARS-CoV-2 (Severe Acute Respiratory Syndrome Coronavirus 2). To fight the pandemic, the search for promising viral drug targets has become a cross-border common goal of the international biomedical research community. Within the international Covid19-NMR consortium, scientists support drug development against SARS-CoV-2 by providing publicly available NMR data on viral proteins and RNAs. The coronavirus nucleocapsid protein (N protein) is an RNA-binding protein involved in viral transcription and replication. Its primary function is the packaging of the viral RNA genome. The highly conserved architecture of the coronavirus N protein consists of an N-terminal RNA-binding domain (NTD), followed by an intrinsically disordered Serine/Arginine (SR)-rich linker and a C-terminal dimerization domain (CTD). Besides its involvement in oligomerization, the CTD of the N protein (N-CTD) is also able to bind to nucleic acids by itself, independent of the NTD. Here, we report the near-complete NMR backbone chemical shift assignments of the SARS-CoV-2 N-CTD to provide the basis for downstream applications, in particular site-resolved drug binding studies.
- Subjects :
- Carbon Isotopes
Crystallography, X-Ray
Dimerization
Drug Design
Hydrogen
Hydrogen-Ion Concentration
Nitrogen Isotopes
Phosphoproteins chemistry
Protein Binding
Protein Domains
Protein Interaction Mapping
Protein Structure, Secondary
Coronavirus Nucleocapsid Proteins chemistry
Magnetic Resonance Spectroscopy
SARS-CoV-2 chemistry
Subjects
Details
- Language :
- English
- ISSN :
- 1874-270X
- Volume :
- 15
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Biomolecular NMR assignments
- Publication Type :
- Academic Journal
- Accession number :
- 33270159
- Full Text :
- https://doi.org/10.1007/s12104-020-09995-y