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1 H, 13 C, and 15 N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein.

Authors :
Korn SM
Lambertz R
Fürtig B
Hengesbach M
Löhr F
Richter C
Schwalbe H
Weigand JE
Wöhnert J
Schlundt A
Source :
Biomolecular NMR assignments [Biomol NMR Assign] 2021 Apr; Vol. 15 (1), pp. 129-135. Date of Electronic Publication: 2020 Dec 03.
Publication Year :
2021

Abstract

The current outbreak of the highly infectious COVID-19 respiratory disease is caused by the novel coronavirus SARS-CoV-2 (Severe Acute Respiratory Syndrome Coronavirus 2). To fight the pandemic, the search for promising viral drug targets has become a cross-border common goal of the international biomedical research community. Within the international Covid19-NMR consortium, scientists support drug development against SARS-CoV-2 by providing publicly available NMR data on viral proteins and RNAs. The coronavirus nucleocapsid protein (N protein) is an RNA-binding protein involved in viral transcription and replication. Its primary function is the packaging of the viral RNA genome. The highly conserved architecture of the coronavirus N protein consists of an N-terminal RNA-binding domain (NTD), followed by an intrinsically disordered Serine/Arginine (SR)-rich linker and a C-terminal dimerization domain (CTD). Besides its involvement in oligomerization, the CTD of the N protein (N-CTD) is also able to bind to nucleic acids by itself, independent of the NTD. Here, we report the near-complete NMR backbone chemical shift assignments of the SARS-CoV-2 N-CTD to provide the basis for downstream applications, in particular site-resolved drug binding studies.

Details

Language :
English
ISSN :
1874-270X
Volume :
15
Issue :
1
Database :
MEDLINE
Journal :
Biomolecular NMR assignments
Publication Type :
Academic Journal
Accession number :
33270159
Full Text :
https://doi.org/10.1007/s12104-020-09995-y