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Clostridium fessum sp. nov., isolated from human faeces.

Authors :
Seo B
Jeon K
Baek I
Lee YM
Baek K
Ko G
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 Jan; Vol. 71 (1). Date of Electronic Publication: 2020 Nov 30.
Publication Year :
2021

Abstract

An obligately anaerobic, Gram-stain-positive and spore-forming strain, SNUG30386 <superscript>T</superscript> was isolated from a faecal sample of a healthy Korean subject. The strain formed a round ivory-coloured colony and cells were chained rods with tapered ends, approximately 2.0-2.5×0.6-0.8 μm in size. The taxonomic analysis indicated that strain SNUG30386 <superscript>T</superscript> was within the family Lachnospiraceae . According to the 16S rRNA gene sequence similarity, the closest species to strain SNUG30386 <superscript>T</superscript> was Clostridium symbiosum (95.6 %), followed by Enterocloster asparagiformis (94.8 %), Enterocloster clostridioformis (94.8 %) and Enterocloster lavalensis (94.6 %). The evolutionary tree based on 16S rRNA gene sequences demonstrated that strain SNUG30386 <superscript>T</superscript> had split apart at a unique branch point far from other close relatives. Its DNA G+C content was 48.3 mol% calculated from the whole genome sequence. The major cellular fatty acids were C <subscript>16 : 0</subscript> and C <subscript>14 : 0</subscript> . Compared to those of the closely related species, strain SNUG30386 <superscript>T</superscript> showed distinct biochemical activities such as being unable to utilize most of carbon sources except d-glucose and l-arabinose. As a result, based on its unique phylogenetic clade and taxonomic characteristics, we conclude that strain SNUG30386 <superscript>T</superscript> represents a novel species within the genus Clostridium , for which the name Clostridium fessum sp. nov. is proposed. The type strain of the novel species is SNUG30386 <superscript>T</superscript> (=KCTC 15633 <superscript>T</superscript> = JCM 32258 <superscript>T</superscript> ).

Details

Language :
English
ISSN :
1466-5034
Volume :
71
Issue :
1
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
33253079
Full Text :
https://doi.org/10.1099/ijsem.0.004579