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Whole genome sequence of Serratia marcescens 39_H1, a potential hydrolytic and acidogenic strain.

Authors :
Obi LU
Tekere M
Roopnarain A
Sanko T
Maguvu TE
Bezuidenhout CC
Adeleke RA
Source :
Biotechnology reports (Amsterdam, Netherlands) [Biotechnol Rep (Amst)] 2020 Oct 09; Vol. 28, pp. e00542. Date of Electronic Publication: 2020 Oct 09 (Print Publication: 2020).
Publication Year :
2020

Abstract

Here, we report a high quality annotated draft genome of Serratia marcescens 39_H1, a Gram-negative facultative anaerobe that was isolated from an anaerobic digester. The strain exhibited hydrolytic/acidogenic properties by significantly improving methane production when used as a single isolate inoculum during anaerobic digestion of water hyacinth and cow dung. The total genome size of the isolate was 5,106,712 bp which corresponds to an N50 of 267,528 and G + C content of 59.7 %. Genome annotation with the NCBI Prokaryotic Genome Annotation Pipeline (PGAP) predicted a total of 4,908 genes of which 4,755 were protein coding genes; there were no plasmids detected. A number of genes associated with hydrolytic/acidogenic activities as well as other metabolic activities were identified and discussed.<br />Competing Interests: The authors have no competing interests to declare.<br /> (© 2020 The Authors.)

Details

Language :
English
ISSN :
2215-017X
Volume :
28
Database :
MEDLINE
Journal :
Biotechnology reports (Amsterdam, Netherlands)
Publication Type :
Academic Journal
Accession number :
33102161
Full Text :
https://doi.org/10.1016/j.btre.2020.e00542