Back to Search Start Over

Sphingomonas hominis sp. nov., isolated from hair of a 21-year-old girl.

Authors :
Zhang DF
Cui XW
Zhao Z
Zhang AH
Huang JK
Li WJ
Source :
Antonie van Leeuwenhoek [Antonie Van Leeuwenhoek] 2020 Oct; Vol. 113 (10), pp. 1523-1530. Date of Electronic Publication: 2020 Aug 11.
Publication Year :
2020

Abstract

A Gram-stain-negative, aerobic, motile strain, HHU CXW <superscript>T</superscript> , was isolated from hair of a healthy 21-year-old female student of Hohai University, Nanjing, China. The 16S rRNA gene sequence analysis indicated that HHU CXW <superscript>T</superscript> represents a member of the genus Sphingomonas with the highest sequence similarity (97.6%) to the type strain S. aquatilis JSS7 <superscript>T</superscript> . HHU CXW <superscript>T</superscript> grew at 4-35 °C and pH 6-8, with optimum growth at 28 °C and pH 7. Tolerance to NaCl was up to 2% (w/v) with optimum growth in 0.5-1.0% NaCl. The major fatty acids were C <subscript>16:0</subscript> , C <subscript>17:1</subscript> ω6c, C <subscript>18:1</subscript> ω7c11-methyl, summed feature 3 (C <subscript>16:1</subscript> ω7c and/or C <subscript>16:1</subscript> ω6c), and summed feature 8 (C <subscript>18:1</subscript> ω7c and/or C <subscript>18:1</subscript> ω6c). The predominant isoprenoid quinone was ubiquinone-10. The polar lipids were diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), phosphatidylglycerol (PG), sphingoglycolipid (SGL), phosphatidylinositol mannosides (PIM), and an unidentified glycolipid (GL). The DNA G + C content was 67.1%. The average nucleotide identity (ANI) values and digital DNA-DNA hybridization (dDDH) between HHU CXW <superscript>T</superscript> and closely related members of the genus Sphingomonas were all below the cut-off level (95-96% and 70%, respectively) for species delineation. On the basis of the phenotypic, phylogenetic and chemotaxonomic characterizations, HHU CXW <superscript>T</superscript> represents a novel species of the genus Sphingomonas, for which the name Sphingomonas hominis sp. nov. is proposed. The type strain is HHU CXW <superscript>T</superscript> (= KCTC 72946 <superscript>T</superscript>  = CGMCC 1.17504 <superscript>T</superscript>  = MCCC 1K04223 <superscript>T</superscript> ).

Details

Language :
English
ISSN :
1572-9699
Volume :
113
Issue :
10
Database :
MEDLINE
Journal :
Antonie van Leeuwenhoek
Publication Type :
Academic Journal
Accession number :
32783129
Full Text :
https://doi.org/10.1007/s10482-020-01460-z