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Evaluation of Viral Recovery Methodologies from Solid Waste Landfill Leachate.

Authors :
Lanzarini NM
Marinho Mata R
Mendes Saggioro E
Costa Moreira J
Ferreira Mannarino C
Pereira Miagostovich M
Source :
Food and environmental virology [Food Environ Virol] 2020 Sep; Vol. 12 (3), pp. 209-217. Date of Electronic Publication: 2020 Jun 23.
Publication Year :
2020

Abstract

Leachate from solid waste landfill is a dark liquid of variable composition and possible source of contamination of groundwater and surface waters. This study aims to assess skimmed milk flocculation and ultracentrifugation as viral concentration methods associated to different nucleic acid extraction protocols in order to establish a methodology for virus recovery from sanitary landfill leachate. Spiking experiments using human adenovirus (HAdV) and bacteriophage PP7 revealed the association of QIAamp Fast DNA Stool mini kit® nucleic acid extraction and ultracentrifugation as an effective method for recovering HAdV (346.18%) and PP7 (523.97%) when compared to organic flocculation method (162.64% for HAdV and 0.61% for PP7) that presented PCR inhibition in all undiluted samples. Ultracentrifugation applied in three landfill samples confirm efficiency of the methodology detecting HAdV in all samples with a mean of 3.44E + 06 ± 1.56E + 06 genomic copies/mL. Nucleotide sequencing characterized HAdV as belonging to group B and F. JC polyomavirus (JCPyV) was also investigated in those samples; however, detection was not observed. Methodologies for detection of viruses in leachate can be useful to generate data for future health risk analysis of workers who have contact with solid urban waste, as well as populations exposed to different environmental matrices contaminated by these effluents.

Details

Language :
English
ISSN :
1867-0342
Volume :
12
Issue :
3
Database :
MEDLINE
Journal :
Food and environmental virology
Publication Type :
Academic Journal
Accession number :
32578012
Full Text :
https://doi.org/10.1007/s12560-020-09431-3