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A clinically and genomically annotated nerve sheath tumor biospecimen repository.

Authors :
Pollard K
Banerjee J
Doan X
Wang J
Guo X
Allaway R
Langmead S
Slobogean B
Meyer CF
Loeb DM
Morris CD
Belzberg AJ
Blakeley JO
Rodriguez FJ
Guinney J
Gosline SJC
Pratilas CA
Source :
Scientific data [Sci Data] 2020 Jun 19; Vol. 7 (1), pp. 184. Date of Electronic Publication: 2020 Jun 19.
Publication Year :
2020

Abstract

Nerve sheath tumors occur as a heterogeneous group of neoplasms in patients with neurofibromatosis type 1 (NF1). The malignant form represents the most common cause of death in people with NF1, and even when benign, these tumors can result in significant disfigurement, neurologic dysfunction, and a range of profound symptoms. Lack of human tissue across the peripheral nerve tumors common in NF1 has been a major limitation in the development of new therapies. To address this unmet need, we have created an annotated collection of patient tumor samples, patient-derived cell lines, and patient-derived xenografts, and carried out high-throughput genomic and transcriptomic characterization to serve as a resource for further biologic and preclinical therapeutic studies. In this work, we release genomic and transcriptomic datasets comprised of 55 tumor samples derived from 23 individuals, complete with clinical annotation. All data are publicly available through the NF Data Portal and at http://synapse.org/jhubiobank.

Details

Language :
English
ISSN :
2052-4463
Volume :
7
Issue :
1
Database :
MEDLINE
Journal :
Scientific data
Publication Type :
Academic Journal
Accession number :
32561749
Full Text :
https://doi.org/10.1038/s41597-020-0508-5