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Structural and biochemical analysis of phosphoethanolamine methyltransferase from the pine wilt nematode Bursaphelenchus xylophilus.
- Source :
-
Molecular and biochemical parasitology [Mol Biochem Parasitol] 2020 Jul; Vol. 238, pp. 111291. Date of Electronic Publication: 2020 May 30. - Publication Year :
- 2020
-
Abstract
- In free-living and parasitic nematodes, the methylation of phosphoethanolamine to phosphocholine provides a key metabolite to sustain phospholipid biosynthesis for growth and development. Because the phosphoethanolamine methyltransferases (PMT) of nematodes are essential for normal growth and development, these enzymes are potential targets of inhibitor design. The pine wilt nematode (Bursaphelenchus xylophilus) causes extensive damage to trees used for lumber and paper in Asia. As a first step toward testing BxPMT1 as a potential nematicide target, we determined the 2.05 Å resolution x-ray crystal structure of the enzyme as a dead-end complex with phosphoethanolamine and S-adenosylhomocysteine. The three-dimensional structure of BxPMT1 served as a template for site-directed mutagenesis to probe the contribution of active site residues to catalysis and phosphoethanolamine binding using steady-state kinetic analysis. Biochemical analysis of the mutants identifies key residues on the β1d-α6 loop (W123F, M126I, and Y127F) and β1e-α7 loop (S155A, S160A, H170A, T178V, and Y180F) that form the phosphobase binding site and suggest that Tyr127 facilitates the methylation reaction in BxPMT1.<br />Competing Interests: Declaration of Competing Interest The authors have no conflicting interests.<br /> (Copyright © 2020 Elsevier B.V. All rights reserved.)
- Subjects :
- Amino Acid Sequence
Animals
Binding Sites
Cloning, Molecular
Crystallography, X-Ray
Escherichia coli genetics
Escherichia coli metabolism
Ethanolamines metabolism
Gene Expression
Genetic Vectors chemistry
Genetic Vectors metabolism
Helminth Proteins genetics
Helminth Proteins metabolism
Kinetics
Methyltransferases genetics
Methyltransferases metabolism
Models, Molecular
Nematoda genetics
Protein Binding
Protein Conformation, alpha-Helical
Protein Conformation, beta-Strand
Protein Interaction Domains and Motifs
Recombinant Proteins chemistry
Recombinant Proteins genetics
Recombinant Proteins metabolism
Sequence Alignment
Sequence Homology, Amino Acid
Substrate Specificity
Thermodynamics
Ethanolamines chemistry
Helminth Proteins chemistry
Methyltransferases chemistry
Nematoda enzymology
Pinus parasitology
Plant Diseases parasitology
Subjects
Details
- Language :
- English
- ISSN :
- 1872-9428
- Volume :
- 238
- Database :
- MEDLINE
- Journal :
- Molecular and biochemical parasitology
- Publication Type :
- Academic Journal
- Accession number :
- 32479776
- Full Text :
- https://doi.org/10.1016/j.molbiopara.2020.111291